DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and si:ch211-246m6.4

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_001340709.1 Gene:si:ch211-246m6.4 / 100000527 ZFINID:ZDB-GENE-050208-498 Length:193 Species:Danio rerio


Alignment Length:165 Identity:58/165 - (35%)
Similarity:89/165 - (53%) Gaps:21/165 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DEHSSESDDEDDAYSSGFNSDQENTEK-TFCPFSRRSHKPRRLKCASQ----MAQQRQAANLRER 96
            |..|..||.:|      .:|..:::|| |......|.|:..|.:..|:    :::||||||.|||
Zfish    35 DTQSLPSDPDD------LDSGSDSSEKSTGAGSPTRGHREVRRRRGSRRLAGVSKQRQAANARER 93

  Fly    97 RRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSE--MVKKDKNGNEPGLS----L 155
            .|..|:|.||..|||.|||.|.:::|||::||:||.|||:.|:.  ::.:|....:|.|.    |
Zfish    94 DRTHSVNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVLLLGEDCRDGQPCLKYHNIL 158

  Fly   156 QRNYQ-KEPPKKIILKDRTGGVAHSLSWYRKGDRY 189
            |.|.. |.||.:.|.   |..:::.....|.|:::
Zfish   159 QSNANLKSPPVRPIC---TFCLSNQRKMLRDGEKH 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 27/53 (51%)
si:ch211-246m6.4XP_001340709.1 HLH 84..135 CDD:278439 31/50 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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