DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GNA12 and Galphaq

DIOPT Version :9

Sequence 1:NP_031379.2 Gene:GNA12 / 2768 HGNCID:4380 Length:381 Species:Homo sapiens
Sequence 2:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster


Alignment Length:414 Identity:152/414 - (36%)
Similarity:224/414 - (54%) Gaps:65/414 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    11 CLLPAEAGGARERRAGSGARDAEREARRRSRDIDALLARERRAVRRLVKILLLGAGESGKSTFLK 75
            |.|..||                :|.:|.:::|:..|.|::|..||.:|:||||.||||||||:|
  Fly     3 CCLSEEA----------------KEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIK 51

Human    76 QMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARDKLGIPWQYSENEKHGMFLMAFENKAGL 140
            |||||||..:..:....:...:|.||....:.::.|.|.|.|.:...|:.:....:|:.:.:.  
  Fly    52 QMRIIHGSGYSDEDKRGYIKLVFQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYET-- 114

Human   141 PVEPATFQ-LYVPALSALWRDSGIREAFSRRSEFQLGESVKYFLDNLDRIG-------------- 190
               ..||: .|:.|:..||.|:||:|.:.||.|:||.:|.||:|.:|||:.              
  Fly   115 ---VTTFEDPYLNAIKTLWDDAGIQECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRV 176

Human   191 -----------------------------QLNYFPSKQDILLARKATKGIVEHDFVIKKIPFKMV 226
                                         |.:|.|::||||.||..|.||:|:.|.:..|.|:||
  Fly   177 RVPTTGIIEYPFDLEEIRFSYLSDLARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMV 241

Human   227 DVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFETIVNNKLFFNVSI 291
            |||||||:|:||..||:.:|||:|:|:.|||||:|.|....||:.||..:|.||:....|.|.|:
  Fly   242 DVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSV 306

Human   292 ILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLEDVQRYLVQCFDRKRRNRSKPLFHHFTTAIDT 356
            ||||||.|||.||:....:..:||::.|........:.::::.|.....:..|.::.|||.|.||
  Fly   307 ILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAITAREFILRMFVDLNPDSEKIIYSHFTCATDT 371

Human   357 ENVRFVFHAVKDTILQENLKDIML 380
            ||::.||.||||||:|..||:..|
  Fly   372 ENIKLVFCAVKDTIMQNALKEFNL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNA12NP_031379.2 G_alpha 42..379 CDD:214595 145/380 (38%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 59..72 10/12 (83%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 200..208 5/7 (71%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 223..232 7/8 (88%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 292..299 6/6 (100%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 351..356 2/4 (50%)
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 137/360 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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