DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GLRA2 and glra2

DIOPT Version :10

Sequence 1:NP_002054.1 Gene:GLRA2 / 2742 HGNCID:4327 Length:452 Species:Homo sapiens
Sequence 2:XP_004912302.1 Gene:glra2 / 100494348 XenbaseID:XB-GENE-958032 Length:488 Species:Xenopus tropicalis


Alignment Length:490 Identity:418/490 - (85%)
Similarity:426/490 - (86%) Gaps:40/490 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPN 65
            ||||||.|||||.|...|||.|||||||:||:||||.|  .:|||||||||||||||||||||||
 Frog     1 MNRQLVKILTALLALIFETNKFRTAFCKEHDTRSGKSP--PMSPSDFLDKLMGRTSGYDARIRPN 63

Human    66 FKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWKP 130
            |||||||||||||||||||:.||||||||||||||.|||.||:||||||||||||||||||||||
 Frog    64 FKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLSYSEYPDDSLDLDPSMLDSIWKP 128

Human   131 DLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGY 195
            ||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||.||||||||
 Frog   129 DLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGY 193

Human   196 TMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQ 260
            |||||||||||..|||||:||||||||||||.|||||||||||||||||||||||||||||||||
 Frog   194 TMNDLIFEWLSTSPVQVADGLTLPQFILKEENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQ 258

Human   261 MYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   259 MYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCL 323

Human   326 LFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK------------------------------ 360
            |||||||||||||||||||||||||||||||||:|                              
 Frog   324 LFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQSKTVLVGNESVESVRRMNGLRSTDSSAYGTLN 388

Human   361 --------EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKR 417
                    ||||.||||||||||||||||||||||||||||..|.|..|||.|:|||||||||||
 Frog   389 QIYNPSLREEDVARESRFNFSGYGMGHCLQVKDGTAVKATPPIPPPPQPKDADSIKKKFVDRAKR 453

Human   418 IDTISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 452
            |||||||||||||||||||||||||||||||||||
 Frog   454 IDTISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLRA2NP_002054.1 LIC 46..441 CDD:273305 373/432 (86%)
glra2XP_004912302.1 LIC 44..477 CDD:273305 373/432 (86%)

Return to query results.
Submit another query.