Sequence 1: | XP_006541006.1 | Gene: | Sergef / 27414 | MGIID: | 1351630 | Length: | 465 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
Alignment Length: | 358 | Identity: | 95/358 - (26%) |
---|---|---|---|
Similarity: | 155/358 - (43%) | Gaps: | 63/358 - (17%) |
- Green bases have known domain annotations that are detailed below.
Mouse 69 GDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCP-IRQVACGWDFTIMLTEKGQVLSCGSNAFG 132
Mouse 133 QLG---VPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQN 194
Mouse 195 LPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELYVWGRNKHGQ---LASRAVF---- 251
Mouse 252 -----LPLPQRI---EAHYFQDEKVTAVW-SGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPE- 306
Mouse 307 AQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDG-T 369
Mouse 370 ESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sergef | XP_006541006.1 | ATS1 | 22..370 | CDD:227511 | 83/324 (26%) |
RCC1 | 356..402 | CDD:366085 | 15/46 (33%) | ||
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 16/48 (33%) |
RCC1 | 92..141 | CDD:278826 | 16/51 (31%) | ||
RCC1_2 | 131..158 | CDD:290274 | 9/26 (35%) | ||
RCC1 | 144..193 | CDD:278826 | 16/56 (29%) | ||
RCC1_2 | 182..209 | CDD:290274 | 8/26 (31%) | ||
RCC1 | 363..414 | CDD:278826 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167833509 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |