| Sequence 1: | NP_001034670.1 | Gene: | Abca3 / 27410 | MGIID: | 1351617 | Length: | 1704 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
| Alignment Length: | 848 | Identity: | 174/848 - (20%) |
|---|---|---|---|
| Similarity: | 305/848 - (35%) | Gaps: | 244/848 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 523 PEDLVAGIKIKHLSKVFQVGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSLLTGLFPPTS 587
Mouse 588 GHAYIHGYEISQDMAQI-RKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHI 651
Mouse 652 LSLEDKRDLRSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQ--QKSDR 714
Mouse 715 TVLLTTHFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISQLVHH 779
Mouse 780 HVPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELG---IASFGASVTTMEEVFLRVGK 841
Mouse 842 LVDTSMDIQAIQLPALQYQ-------HERRASDWALD-------------------------SNL 874
Mouse 875 CGVMDPTNGIGALIEEEEVLVKLNTGL-----ALHCQQFWAMFL--------------------- 913
Mouse 914 -KKAAYSWRE---WKMVAAQVLVPLTC---------LTLALLAIH--------YTSEIFDDPLL- 956
Mouse 957 --KLSLNEYGRTVVPFSVPGTSRLA-QQLSENL-RDMLQAER-----------QEPREVLGDLEE 1006
Mouse 1007 FLVFRASVEGGGFNERCLVATSFKDRGE----LTVVTALFNNQAYHSPATALAIVDNLL------ 1061
Mouse 1062 ---------------FKLLCGPQASIEISNYPQPRNTLQVAKDHFNEGRKGFDIALNLLIAMAFL 1111
Mouse 1112 ASTFSILAVSERAVQAKHVQFVSGVHVATFWFSALLWDL---------ISFLVPSLLLLVVFQAF 1167
Mouse 1168 NVHAFTRDGHMADLLLLLMLYGWAIIPLMYLMSFFFSAASTAYTRLTIFNILSGIATFIMVTIMR 1232
Mouse 1233 IPA 1235 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Abca3 | NP_001034670.1 | rim_protein | 1..>43 | CDD:130324 | |
| rim_protein | <206..1699 | CDD:130324 | 174/848 (21%) | ||
| snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 62/253 (25%) |
| ABC_DR_subfamily_A | 74..286 | CDD:213197 | 61/248 (25%) | ||
| pip_yhgE_Nterm | 427..>474 | CDD:276270 | 6/46 (13%) | ||
| ABC2_membrane_3 | 429..801 | CDD:289468 | 84/427 (20%) | ||
| ABC2_membrane | 601..769 | CDD:279410 | 39/204 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||