Sequence 1: | NP_038879.2 | Gene: | Abca8b / 27404 | MGIID: | 1351668 | Length: | 1620 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
Alignment Length: | 233 | Identity: | 76/233 - (32%) |
---|---|---|---|
Similarity: | 122/233 - (52%) | Gaps: | 17/233 - (7%) |
- Green bases have known domain annotations that are detailed below.
Mouse 1297 KKKAKIATRNVSFCVRKGEILGLLGHNGAGKSTSLKMISGDTKVTAGQVLLKGSREG----DTPG 1357
Mouse 1358 -FLGYCPQENALWPNLTVKEHLEIFAAVRGLRKSHAAVAITRLADALKLQDQLKSPVKTLSEGVK 1421
Mouse 1422 RKLCFVLSILGNPSILLLDEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRV 1486
Mouse 1487 AILVSGRLRCIGSIQHLKSKFGKDYLLEM-KVKTLEQV 1523 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Abca8b | NP_038879.2 | rim_protein | <265..1596 | CDD:130324 | 76/233 (33%) |
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 70/214 (33%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 68/210 (32%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | |||
ABC2_membrane_3 | 429..801 | CDD:289468 | |||
ABC2_membrane | 601..769 | CDD:279410 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |