DRSC/TRiP Functional Genomics Resources

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Protein Alignment BIN1 and amph-1

DIOPT Version :10

Sequence 1:NP_647593.1 Gene:BIN1 / 274 HGNCID:1052 Length:593 Species:Homo sapiens
Sequence 2:NP_501711.1 Gene:amph-1 / 177797 WormBaseID:WBGene00010272 Length:461 Species:Caenorhabditis elegans


Alignment Length:64 Identity:15/64 - (23%)
Similarity:18/64 - (28%) Gaps:29/64 - (45%)


- Green bases have known domain annotations that are detailed below.


Human    17 VQADSTQETDEET-----------------KTDDQPGEEDQGV-----------SVSFEDPERY 52
            :.||..|...|.|                 |....|..|| ||           |..|..|::|
 Worm   150 IDADELQRDPETTLRGLCDDLEIPFQASMLKWKAGPIPED-GVWAPWWYKSVHESTGFSSPKKY 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BIN1NP_647593.1 Interaction with BIN2. /evidence=ECO:0000269|PubMed:10903846 2..122 15/64 (23%)
BAR_Amphiphysin_I_II 31..272 CDD:153295 9/33 (27%)
PHA03247 <276..507 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..354
Clathrin-binding 378..421
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..488
SH3_Bin1 521..592 CDD:213015
amph-1NP_501711.1 BAR 22..240 CDD:472257 15/64 (23%)
PRK12323 <196..326 CDD:481241 4/17 (24%)
SH3 400..461 CDD:473055
Blue background indicates that the domain is not in the aligned region.

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