DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GLO1 and glo1

DIOPT Version :10

Sequence 1:NP_006699.2 Gene:GLO1 / 2739 HGNCID:4323 Length:184 Species:Homo sapiens
Sequence 2:NP_998316.1 Gene:glo1 / 368213 ZFINID:ZDB-GENE-030722-9 Length:180 Species:Danio rerio


Alignment Length:174 Identity:127/174 - (72%)
Similarity:150/174 - (86%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    10 GLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLA 74
            |:|:|||.:.|.:....||||::||||||||||.||||||||:|||||:||.|||.|:|:||||.
Zfish     5 GVTNEAAAAACKEGSSITKDFMMQQTMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLG 69

Human    75 YEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSAC 139
            ||||.:||.:..|:.||..||:||:|||||||:|.|::||||||||||||||||||||||||:||
Zfish    70 YEDKKEIPADVKERTAWTFSRRATIELTHNWGSETDDSQSYHNGNSDPRGFGHIGIAVPDVYAAC 134

Human   140 KRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATL 183
            |.|||.||.||||||:||||||||||||||||||||:||.|.::
Zfish   135 KLFEENGVTFVKKPDEGKMKGLAFIQDPDGYWIEILSPNNMVSI 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLO1NP_006699.2 VOC 20..183 CDD:472697 122/162 (75%)
glo1NP_998316.1 GlxI_Zn 27..170 CDD:319900 112/142 (79%)

Return to query results.
Submit another query.