DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GLO1 and glo1

DIOPT Version :10

Sequence 1:NP_006699.2 Gene:GLO1 / 2739 HGNCID:4323 Length:184 Species:Homo sapiens
Sequence 2:NP_596010.1 Gene:glo1 / 2539736 PomBaseID:SPBC12C2.12C Length:302 Species:Schizosaccharomyces pombe


Alignment Length:158 Identity:71/158 - (44%)
Similarity:100/158 - (63%) Gaps:15/158 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    21 SDADP--STKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 83
            |:..|  :..:|....||:|||||:.|:.||.: |||.:|.|.|.|..||:.|||||  .:|:|:
pombe   154 SETKPKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAY--PSDLPR 215

Human    84 EKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGN-SDPRGFGHIGIAVPDVYSACKRFEELGV 147
            .         .|:..||||||||||.:....||||| .|.:|:||:.|:|.::.:||.:||..|:
pombe   216 H---------DREGLLELTHNWGTEKESGPVYHNGNDGDEKGYGHVCISVDNINAACSKFEAEGL 271

Human   148 KFVKKPDDGKMKGLAFIQDPDGYWIEIL 175
            .|.||..||:||.:||:.|||.||:|::
pombe   272 PFKKKLTDGRMKDIAFLLDPDNYWVEVI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLO1NP_006699.2 VOC 20..183 CDD:472697 71/158 (45%)
glo1NP_596010.1 GlxI_Zn 12..151 CDD:319900
GlxI_Zn 167..299 CDD:319900 68/143 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.