DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prmt5 and csul

DIOPT Version :9

Sequence 1:NP_038796.2 Gene:Prmt5 / 27374 MGIID:1351645 Length:637 Species:Mus musculus
Sequence 2:NP_477184.1 Gene:csul / 36809 FlyBaseID:FBgn0015925 Length:610 Species:Drosophila melanogaster


Alignment Length:592 Identity:241/592 - (40%)
Similarity:347/592 - (58%) Gaps:34/592 - (5%)


- Green bases have known domain annotations that are detailed below.


Mouse    57 EPAKNRPGPQTRSDLLLSGRDWNTLIVGKLSPWIHPDSKVEKIRRNSEAAMLQELNFGAYL-GLP 120
            ||.::.|   |....:|||.|||:.::..:|. ::.||..:|:|.:::...::::.:..:| .:.
  Fly    42 EPHESDP---TYPATILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVG 102

Mouse   121 AFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLVAPEDLRDDVIENAPTTHTEEYSGEE-- 183
            ..::.|...:|.|||.::.........|..::::||:..|        |.|...|.::.:.||  
  Fly   103 NLMVRLRGPENENLASIVLAKTKDDFPSGNWFIQVPITNP--------ELATFEHRKDATAEEVA 159

Mouse   184 -----KTWMWWHNFRTLCDYSKRIAVALEIG-ADLPSNHVIDRWLGEPIKAAILPTSIFLTNKKG 242
                 ..|.||:|.|.:..:|.::.|.:|:. ||.||...:.|||||||:|.|:|:|:|:.|:..
  Fly   160 EAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEAIIIPSSLFVRNRSN 224

Mouse   243 FPVLSKVQQRLIFRLLKLEVQFIITGTNHHSEKEFCSYLQYLEYLSQNRPPPNAYELFAKGYEDY 307
            :.||.|..|.::...:.:....||: || .::|..|.|..|:..|..:    |..:.....||:.
  Fly   225 YCVLKKEWQLIVGHFISVRANIIIS-TN-PNDKALCQYADYVNKLIND----NCDKHMLNSYENM 283

Mouse   308 LQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKETNVQVLMVLGAGRGPLV 372
            |:.|||||.|||::.||||||.||:||..||.|:...|||||...|.:|.:.|:|:||.|||||.
  Fly   284 LEIPLQPLCDNLDTYTYEVFETDPVKYKLYQDAVQAALLDRVSAAEAKTKLTVVMLLGGGRGPLA 348

Mouse   373 NASLRAAKQAERRIRLYAVEKNPNAVVTLENWQFEEWGSQ-VTVVSSDMREWVAPEKADIIVSEL 436
            .|...||:..:|::|||.:||||||:.||.|.....|..: |.:.|.|||::..||.|||:||||
  Fly   349 RAVFNAAELTKRKVRLYIIEKNPNAIRTLSNMVKTLWADKDVHIFSKDMRDFSPPELADIMVSEL 413

Mouse   437 LGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVRACREKDRDPEAQFEMP 501
            ||||.||||||||||||...||.||:|||.:.||::.|:.|:.|:..|  |:.....|  .|:..
  Fly   414 LGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMSAVLHQNV--CQLLPTYP--AFDYG 474

Mouse   502 YVVRLHNFHQLSAPKPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYRDITLS 566
            ||..|.|.:.:..|:..|.|.||||...|||.|..|:.|.|..:.||||..|||:|.||:||.||
  Fly   475 YVSLLKNIYHIDEPQALFEFVHPNRAENIDNTRCKTVSFKVNKDCVLHGIGGYFDTHLYKDICLS 539

Mouse   567 IRPETHSPGMFSWFPIFFPIKQPITVHEGQNICVRFWRCSNSKKVWYEW-AVTAPVCSSIHNPTG 630
            |.|.||:||||||||:||..: |.|:.|||.|.::||||.::.|||||| .|.:|.....||..|
  Fly   540 INPLTHTPGMFSWFPMFFATR-PRTLREGQTISIQFWRCVDATKVWYEWQVVNSPDDWEHHNTRG 603

Mouse   631 RSYTIGL 637
            ..|.:.|
  Fly   604 TGYNMRL 610

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Prmt5NP_038796.2 TIM barrel. /evidence=ECO:0000250|UniProtKB:O14744 13..292 68/243 (28%)
PRMT5 183..619 CDD:282971 206/445 (46%)
SAMBD 184..465 CDD:293555 131/282 (46%)