DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLI1 and MIG3

DIOPT Version :10

Sequence 1:NP_005260.1 Gene:GLI1 / 2735 HGNCID:4317 Length:1106 Species:Homo sapiens
Sequence 2:NP_010945.1 Gene:MIG3 / 856750 SGDID:S000000830 Length:394 Species:Saccharomyces cerevisiae


Alignment Length:444 Identity:95/444 - (21%)
Similarity:150/444 - (33%) Gaps:155/444 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   298 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY 362
            ::|.:|  |.|.:.:.|||:.|.|.|:||||||:.|..:||.|:||.:.:..:|           
Yeast    14 QRPFRC--EICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRH----------- 65

Human   363 VCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPSISTVEPKREREGGPIREES 427
                            ||.|.|.|.      .:|.:..|......:.:|..|....|...:   |
Yeast    66 ----------------LRTHTKGVQ------RRRIKSKGSRKTVVNTATAAPTTFNENTGV---S 105

Human   428 RLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSSLDEGPCIAGTGL 492
            ...:.:..:.|.....|| :|.            |..:..|||..|..|     .:.|.|     
Yeast   106 LTGIGQSKVPPILISVAQ-NCD------------DVNIRNTGNNNGIVE-----TQAPAI----- 147

Human   493 STLRRLENLRLDQLHQLRPIGTRGLKLPSLSHTGTTVSRRVGPPVSLERRSSSSSSISSAY-TVS 556
                            |.|:    :.:|:..|           |:.....::|.:||:|.| :.|
Yeast   148 ----------------LVPV----INIPNDPH-----------PIPSSLSTTSITSIASVYPSTS 181

Human   557 RRSSLASPFP--PGSPP---ENGASSLPGLMPAQHYLL---RARYASARGGGTSPTAASSLDRIG 613
            ....|.|.||  |.|.|   .:|:|...|.:.:...:.   |...|:..|    |.:.||...  
Yeast   182 PFQYLKSGFPEDPASTPYVHSSGSSLALGELSSNSSIFSKSRRNLAAMSG----PDSLSSSKN-- 240

Human   614 GLPMPPWRSRAEYPGYNPNAGVTRRASDPAQAADRP----APARVQRFKSLGCVHTPPTVAGGGQ 674
                            ..:|.:..:.|.|:::..||    :|.|          ...|:|..|..
Yeast   241 ----------------QSSASLLSQTSHPSKSFSRPPTDLSPLR----------RIMPSVNTGDM 279

Human   675 NFDPYLPTSVYSPQPPSIT--ENAAMDARGLQEEPEVGTSMVGSGLNPYMDFPP 726
            .....:..|..|....|:|  :.||.|              :|.|:  :.|.||
Yeast   280 EISRTVSVSSSSSSLTSVTYDDTAAKD--------------MGMGI--FFDRPP 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLI1NP_005260.1 Interaction with SUFU. /evidence=ECO:0000269|PubMed:24217340, ECO:0000269|PubMed:24311597 120..124
FOXP-CC 237..>265 CDD:465036
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 283..291
SFP1 <297..387 CDD:227516 27/88 (31%)
C2H2 Zn finger 303..325 CDD:275368 9/21 (43%)
C2H2 Zn finger 333..356 CDD:275368 7/22 (32%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 345..350 0/4 (0%)
C2H2 Zn finger 364..385 CDD:275368 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..485 21/109 (19%)
Interaction with DNA. /evidence=ECO:0000269|PubMed:8378770 375..381 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..580 18/69 (26%)
PHA03247 <562..1081 CDD:223021 37/179 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..792
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 817..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..942
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1054..1087
SNAG domain. /evidence=ECO:0000250 1..20
MIG3NP_010945.1 COG5048 1..394 CDD:227381 95/444 (21%)
C2H2 Zn finger 19..39 CDD:275368 9/21 (43%)
C2H2 Zn finger 47..69 CDD:275368 9/48 (19%)
Blue background indicates that the domain is not in the aligned region.

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