Sequence 1: | NP_055317.1 | Gene: | PRPF19 / 27339 | HGNCID: | 17896 | Length: | 504 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523783.1 | Gene: | Prp19 / 37123 | FlyBaseID: | FBgn0261119 | Length: | 505 | Species: | Drosophila melanogaster |
Alignment Length: | 510 | Identity: | 336/510 - (65%) |
---|---|---|---|
Similarity: | 415/510 - (81%) | Gaps: | 12/510 - (2%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKP 65
Human 66 PSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREA 130
Human 131 LATLKPQAGLI-VPQAVPSSQPSVV-----GAGEPMDLGELVGMTPEIIQKLQDKATVLTTERKK 189
Human 190 RGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSE 254
Human 255 QILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGD 319
Human 320 YLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Human 385 VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTY 449
Human 450 LALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL 504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PRPF19 | NP_055317.1 | RING-Ubox_PRP19 | 4..56 | CDD:319570 | 28/51 (55%) |
May mediate interaction with PSMC5. /evidence=ECO:0000250|UniProtKB:Q99KP6 | 68..223 | 110/160 (69%) | |||
Prp19 | 69..133 | CDD:400774 | 55/63 (87%) | ||
WD 1 | 219..259 | 24/39 (62%) | |||
WD40 | 223..503 | CDD:238121 | 187/279 (67%) | ||
WD40 repeat | 224..262 | CDD:293791 | 22/37 (59%) | ||
WD 2 | 262..301 | 20/38 (53%) | |||
WD40 repeat | 268..304 | CDD:293791 | 15/35 (43%) | ||
WD 3 | 304..345 | 30/40 (75%) | |||
WD40 repeat | 309..344 | CDD:293791 | 27/34 (79%) | ||
WD 4 | 348..387 | 29/38 (76%) | |||
WD40 repeat | 354..389 | CDD:293791 | 29/34 (85%) | ||
WD 5 | 390..429 | 32/38 (84%) | |||
WD40 repeat | 395..431 | CDD:293791 | 30/35 (86%) | ||
WD 6 | 433..472 | 23/38 (61%) | |||
WD40 repeat | 438..464 | CDD:293791 | 17/25 (68%) | ||
WD 7 | 473..503 | 17/29 (59%) | |||
WD40 repeat | 476..502 | CDD:293791 | 16/25 (64%) | ||
Prp19 | NP_523783.1 | Ubox | 2..68 | CDD:128780 | 35/65 (54%) |
Prp19 | 69..132 | CDD:285771 | 54/62 (87%) | ||
WD40 | 210..503 | CDD:238121 | 198/293 (68%) | ||
WD40 | <225..505 | CDD:225201 | 187/281 (67%) | ||
WD40 repeat | 269..305 | CDD:293791 | 15/35 (43%) | ||
WD40 repeat | 310..345 | CDD:293791 | 27/34 (79%) | ||
WD40 repeat | 354..389 | CDD:293791 | 29/34 (85%) | ||
WD40 repeat | 395..431 | CDD:293791 | 30/35 (86%) | ||
WD40 repeat | 438..484 | CDD:293791 | 27/45 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165159718 | |
Domainoid | 1 | 1.000 | 131 | 1.000 | Domainoid score | I5160 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0289 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6421 | |
Inparanoid | 1 | 1.050 | 686 | 1.000 | Inparanoid score | I706 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1589 |
OMA | 1 | 1.010 | - | - | QHG54686 | |
OrthoDB | 1 | 1.010 | - | - | D1049599at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003405 | |
OrthoInspector | 1 | 1.000 | - | - | oto90088 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102145 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR43995 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R276 |
SonicParanoid | 1 | 1.000 | - | - | X2757 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
17 | 16.750 |