DRSC/TRiP Functional Genomics Resources

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Protein Alignment ANGPTL3 and CG5550

DIOPT Version :10

Sequence 1:NP_055310.1 Gene:ANGPTL3 / 27329 HGNCID:491 Length:460 Species:Homo sapiens
Sequence 2:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster


Alignment Length:205 Identity:69/205 - (33%)
Similarity:99/205 - (48%) Gaps:10/205 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   257 SGMYAIRPSNSQVFHVYCDV-ISGSPWTLIQHRIDGSQNFNETWENYKYGFGRLDGEFWLGLEKI 320
            ||:..|: ..|.|..||||| |:|..|.::|.|:...:||...|.:|:.|||.|.|.|::||..:
  Fly    47 SGVQKIQ-VGSDVIEVYCDVTIAGKGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNL 110

Human   321 YSIVKQSNYVLRIELEDWKDNKHYIEYS-FYLGNHETNYTL-HLVAITGNVPNAIPENKDLVFST 383
            ..|.......|.|||.|:...|.|..|| |::||..:||.: .|.|.:|...:::..:....|||
  Fly   111 NKISSLQPQELYIELVDFAGEKRYAHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFST 175

Human   384 WDH-KAKGHFNCPEGYSGGWWWHDECGE----NNLNGKYNKPRAKSKPERRRGLSWKSQNGRLYS 443
            :|. ......||...|.|.||:. ||..    :||||.|.............|:.|....|..||
  Fly   176 FDRDNDNATINCAARYMGAWWYR-ECLSRIPCSNLNGAYLGGNHTDPALFGSGIVWGEWKGFTYS 239

Human   444 IKSTKMLIHP 453
            .|:..:::.|
  Fly   240 YKTVNIMVRP 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ANGPTL3NP_055310.1 GumC <81..>205 CDD:442439
FReD 243..453 CDD:238040 68/203 (33%)
CG5550NP_001246376.1 FReD 34..250 CDD:238040 69/205 (34%)
Blue background indicates that the domain is not in the aligned region.

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