| Sequence 1: | NP_002130.2 | Gene: | RBMX / 27316 | HGNCID: | 9910 | Length: | 391 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001342863.1 | Gene: | SPAC25G10.01 / 3361412 | PomBaseID: | SPAC25G10.01 | Length: | 297 | Species: | Schizosaccharomyces pombe |
| Alignment Length: | 296 | Identity: | 61/296 - (20%) |
|---|---|---|---|
| Similarity: | 105/296 - (35%) | Gaps: | 106/296 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Human 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSL 74
Human 75 DGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFN 139
Human 140 MSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRD 204
Human 205 VYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAP--PPRDYTYRDYGHSSSRDDYPSRGYSDRDGYG 267
Human 268 RDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPS 303 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RBMX | NP_002130.2 | RRM_RBMX_like | 7..86 | CDD:409816 | 23/75 (31%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 61..391 | 44/245 (18%) | |||
| dnaA | 165..>306 | CDD:237605 | 36/141 (26%) | ||
| RBM1CTR | 173..217 | CDD:400429 | 9/43 (21%) | ||
| Necessary for the association to nascent RNAPII transcripts and nuclear localization | 186..236 | 15/49 (31%) | |||
| Necessary for RNA-binding | 333..391 | ||||
| SPAC25G10.01 | NP_001342863.1 | RRM | 9..>225 | CDD:223796 | 42/220 (19%) |
| RRM_RBMX_like | 100..179 | CDD:240828 | 23/153 (15%) | ||
| RRM | 207..>283 | CDD:330708 | 24/83 (29%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 85 | 1.000 | Inparanoid score | I2004 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.960 | |||||