DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and RabX4

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster


Alignment Length:173 Identity:76/173 - (43%)
Similarity:113/173 - (65%) Gaps:2/173 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
            |:...:|::::|::.|||||:|.|:....:.....:|||:||..|.:.::|..:|||||||||||
  Fly     4 DFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68

Human    70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDL-AERREVS 133
            |||::|.:|||.|..::|.||:|..||:..|..|||.|::.||..|:.||.|||.:. |.:|.|.
  Fly    69 RFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQRMVD 133

Human   134 QQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQ 176
            ::|.|:.:|..||.:.|.|.|.:.|:|..||.|| |.|.|.|:
  Fly   134 KERGEKIAENFDMPFFEVSCKSNINIEDAFLSLA-RKIREQRE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 73/166 (44%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 10/15 (67%)
RabX4NP_733043.1 RAB 9..170 CDD:197555 72/161 (45%)

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