DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and Rab11

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster


Alignment Length:173 Identity:75/173 - (43%)
Similarity:116/173 - (67%) Gaps:3/173 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
            ::||:|||:||||::||||:.|:.|||:..|.....:||||:|..:::|::|:.:|.||||||||
  Fly     6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70

Human    69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVS 133
            ||:|:||.:|||.|...:|.|||....::..:..||||:..:|...::.:|||||.||...|.|.
  Fly    71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135

Human   134 QQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC---RLISE 173
            ...|:.|:|...:.::||||.:|.|||..|.::..   |::|:
  Fly   136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 74/169 (44%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 10/15 (67%)
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 72/163 (44%)

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