DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and RabX6

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_001261219.1 Gene:RabX6 / 38084 FlyBaseID:FBgn0035155 Length:222 Species:Drosophila melanogaster


Alignment Length:173 Identity:63/173 - (36%)
Similarity:95/173 - (54%) Gaps:11/173 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    11 KIVLIGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRS 73
            |::|.|:.||||:.|.|||....|  ...:.:|:|:|.:.:...:|.:::|||:|||.|.||..|
  Fly    10 KVILCGDYGVGKSSLFRRFATNTFITDTDRKSTLGLDHIDREYSVNEKQIKLQLWDTGGMERVAS 74

Human    74 ITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR-EVSQQRA 137
            :|.|||:.|...||.:.:....||..|.:.|.:|..||.|..| .:.|||.||..|. |||.:..
  Fly    75 VTSSYYKFAEGAILVFALDNAASFHSLSQHLLDIVTYAENAKI-FICGNKSDLDGREPEVSDEEV 138

Human   138 EEFSEAQDMYYL-----ETSAKESDNVEKLFLDLACRLISEAR 175
            |.|.|  ..:.|     :||.:....||::|.|::.:|:...|
  Fly   139 EAFCE--QCHSLISATYKTSCRSGAGVEEMFRDISRQLVHANR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 61/167 (37%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 1/7 (14%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 8/15 (53%)
RabX6NP_001261219.1 Rab 10..172 CDD:206640 61/164 (37%)

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