DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and Rab4

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster


Alignment Length:176 Identity:80/176 - (45%)
Similarity:113/176 - (64%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
            |.||:|||.::||:||.||:||:..|.:..|......||||:|..:.|.:.|:.|||||||||||
  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67

Human    69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVS 133
            |||||:|:||||.|...:|.||.|..:||..|..||.:....||..::.:|||||.||.|.|:|:
  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132

Human   134 QQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL 179
            ...|..|::..::.:||||||..:|||:.||..:..::::.....|
  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGEL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 79/166 (48%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 2/7 (29%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 12/15 (80%)
Rab4NP_523777.1 Rab4 9..169 CDD:206696 75/159 (47%)

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