DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and Rab2

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:211 Identity:86/211 - (40%)
Similarity:130/211 - (61%) Gaps:16/211 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70
            |.:|||.::||:.||||:||:.:||...|.|....||||:|..:.:.|:|:::|||||||||||.
  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67

Human    71 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQ 135
            |||||:||||.|...:|.||||..|:|..|..||.:..|::::.::.:|:|||.||..||||.::
  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132

Human   136 RAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL-VNNVS---------SP---- 186
            ..|.|:....:.::||||:.:.|||:.|::.|..:..:.::... :||.:         ||    
  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197

Human   187 LPGEGKSISYLT--CC 200
            |||.|.:.....  ||
  Fly   198 LPGAGGAAGAANSGCC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 76/164 (46%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 3/7 (43%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 12/15 (80%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 84/209 (40%)

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