DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and Rab6

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:161 Identity:68/161 - (42%)
Similarity:101/161 - (62%) Gaps:0/161 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSI 74
            ||:|.:|...||||.|:.||....|.....||||:||:.||:.:....|:||:|||||||||||:
  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77

Human    75 TQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEE 139
            ..||.|.:...::.||||...||....:|:.::.....:.||.:|||||.||:::|:||.:..|.
  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142

Human   140 FSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
            .::..::.::|||||...||::||..:|..|
  Fly   143 KAKELNVMFIETSAKAGYNVKQLFRRVAAAL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 68/161 (42%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 3/7 (43%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 10/15 (67%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 67/159 (42%)

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