DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB30 and Rab30

DIOPT Version :10

Sequence 1:NP_055303.2 Gene:RAB30 / 27314 HGNCID:9770 Length:203 Species:Homo sapiens
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:210 Identity:134/210 - (63%)
Similarity:164/210 - (78%) Gaps:13/210 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG 67
            ||||.|||||||:|||||||||||||||||||||||||||||||||||||:.|||:|||||||||
  Fly     1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAG 65

Human    68 QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREV 132
            |||||||||||||||:||||.|||:|:.:|.|||:|||||::||::||:.:|||||.| .:.||:
  Fly    66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREI 129

Human   133 SQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQ---NTLVNNVSSPLPGEGKSI 194
            ..|..|||::..|||:|||||||::|||:||.::|..||.:||.   ::.....::....||.||
  Fly   130 PTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSI 194

Human   195 ---------SYLTCC 200
                     :...||
  Fly   195 GLGSFSAKAAQSNCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB30NP_055303.2 Rab30 3..171 CDD:133314 124/167 (74%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 36..44 7/7 (100%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 67..83 15/15 (100%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 124/167 (74%)

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