Protein Alignment RAB30 and ypt2

DIOPT Version :9

• Sequence 1: NP_001272988.1
• Gene: RAB30 / 27314
• HGNCID: 9770
• Length: 203
• Species: Homo sapiens
• Sequence 2: NP_594580.1
• Gene: ypt2 / 2543280
• PomBaseID: SPAC9E9.07c
• Length: 200
• Species: Schizosaccharomyces pombe
• Alignment Length: 203
• Identity: 85/203 - (41%)
• Similarity: 136/203 - (66%)
• Gaps: 6/203 - (2%)

Human     1 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65
            ||.:.||:|.|::|||::||||:||:.||::..|.|....|||:||.|:|:|::|:::|||||||
pombe     1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65

Human    66 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130
            |||||||:||.:|||.|..::|.||:|.::||..:..|...:||:||..|..:|:|||.|..::|
pombe    66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130

Human   131 EVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR---QNTLVNNVSSPLPGEGK 192
            :||.::.:..::...:.:||.|||.:.||::.|..|| |.|.:.:   :|...|..::...|..:
pombe   131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLA-REIKKQKIDAENEFSNQANNVDLGNDR 194

Human   193 SISYLTCC 200
            ::.  .||
pombe   195 TVK--RCC 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB30	NP_001272988.1	Rab30	3..171	CDD:133314	77/167 (46%)
		Effector region. /evidence=ECO:0000250	38..46		3/7 (43%)
ypt2	NP_594580.1	Rab8_Rab10_Rab13_like	7..173	CDD:206659	77/166 (46%)
		Ras	11..172	CDD:278499	75/161 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910