DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRCP and Polr3I

DIOPT Version :10

Sequence 1:NP_055293.1 Gene:CRCP / 27297 HGNCID:17888 Length:148 Species:Homo sapiens
Sequence 2:NP_573175.2 Gene:Polr3I / 32678 FlyBaseID:FBgn0030801 Length:238 Species:Drosophila melanogaster


Alignment Length:599 Identity:115/599 - (19%)
Similarity:194/599 - (32%) Gaps:217/599 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   209 LDREEAAEIRLLLTA---------TDGGKPELTGTVQLLITVLDVNDNAPVFD-RSLYTVKLPEN 263
            :.::|:|:|...:|:         |...||   |...|:.|:      .|.|. :|.::: ..|:
  Fly     7 IQKKESAKIHRAITSMIAIDLMSLTTVEKP---GFKNLIATL------RPNFKLKSRWSI-TRED 61

Human   264 VPNGTLVIKVNASD----LDEGVNGDVMYSFSSDVSSDIKSKFHMDTV------SGEIT--VIGI 316
            :||.....|....|    :|..|.|       .|:.||..||..::.|      :.|:.  |:|:
  Fly    62 LPNLYDEYKAKLEDELLSVDHAVLG-------FDLWSDEGSKHEVNGVIVYFLQNNEVVHRVLGV 119

Human   317 IDFEESK--AYKIPLEARDKGFPQLPGHCTILVEVVDANDNAPQLTVSSLSLPVSEDSQPGRVVT 379
            ::..|||  |..|.|     |..:|                            :||....|::|.
  Fly   120 LNCRESKHTAQNIAL-----GLKEL----------------------------ISEYKIEGKIVC 151

Human   380 LISVFDRDSGANGQVTCSLTPHIPFKLVS---------TFKN----------YYSLVLDSALDRE 425
            :.    ||.|:|.|..|.|.....|..:|         ..||          |..||  ..|.:.
  Fly   152 MC----RDGGSNVQNACDLLKCESFDCLSHKLHLAANDATKNMVGVGRVLLLYKKLV--RKLKKS 210

Human   426 TIANYDVIVTARDGGS-------PSLWATASVSV--------------------EVADVNDNAPL 463
            |       |||:...|       |.|....|.||                    ::.:.|:..|.
  Fly   211 T-------VTAKQFESIQEVLELPVLCLQKSSSVRWSHMKLMFDRALIRKSAIEKLMETNNTLPQ 268

Human   464 FAQPEYTVF--VKENNPPGAHIFTVSAMDADAQENALV--SYSLVE------------RRVGERL 512
            ..:.::.|.  |.:...| ..:|:....|.:...:.::  .|:|::            :.:.:|:
  Fly   269 LTENDWNVIQNVSDVFTP-IDLFSKKTQDRETPASQVIPLCYALIDHCKESIDHPEAFKAIEDRM 332

Human   513 LSSYVSVHAESGKVFA--LQP--LDH---------------------------EELELLQFQVSA 546
            ........|.....||  |.|  .||                           .|:.||.....:
  Fly   333 QKELKKYSACRYLQFATLLDPRYKDHFCTDEFKHMFIEEFEKCNEDDVYITSDNEVRLLDSHSDS 397

Human   547 RDAGVPALGSNVTLQVFV----------LDENDNAPTLLGPLANGVGGTMNEVVSRALVPGQVVA 601
            .|. .||..:....:.|:          :...||:.|....:...:..::.:|..|.....:|..
  Fly   398 SDE-APAKNAKFDFEKFIEKRISEQPKPIPNCDNSLTARMEVQRYLSTSVEQVNPRQFWTSRVTT 461

Human   602 KV---------RAVDEDSGYNAWLSFELQPV---AGGVRSPFRVGLYTGEISTTRALEETDALRQ 654
            .|         |.:...||     |.|::.|   ||.:.:.||..||:........|.:.     
  Fly   462 SVYPRLCKFAARFIICPSG-----SAEVERVFSTAGVILNKFRKSLYSEHFKLHLFLSKN----- 516

Human   655 CLLVLVKDHGEPSL 668
               :.:.|:.||:|
  Fly   517 ---IPIMDNTEPNL 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRCPNP_055293.1 RPOL4c 1..127 CDD:128904
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..148
Polr3INP_573175.2 RNA_pol_Rpb4 10..112 CDD:461080 27/118 (23%)
PRK07003 <122..>223 CDD:235906 32/146 (22%)
Blue background indicates that the domain is not in the aligned region.

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