Sequence 1: | NP_037357.1 | Gene: | Cntn6 / 27256 | RGDID: | 62008 | Length: | 1028 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
Alignment Length: | 1171 | Identity: | 271/1171 - (23%) |
---|---|---|---|
Similarity: | 406/1171 - (34%) | Gaps: | 340/1171 - (29%) |
- Green bases have known domain annotations that are detailed below.
Rat 2 RLLWKLVILLPLINSC--AGESRFTRPIFIQEPQDVIFPLDLSRSEIILSCTASGYPSPHYRWKQ 64
Rat 65 NGTDIDFSMTYHYRLDGGSLAISSP------------RTDQDIGIYQCLATNPVGTILSRKAKLQ 117
Rat 118 FAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQEDKR-RFVSQNTGNL 181
Rat 182 YIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEP-----KIEV-----RFPET 236
Rat 237 IQAAKDSSVKLECFALGNPVPDISWRR-LDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAG 300
Rat 301 NLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGERLNTEERIQ 365
Rat 366 TENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIE 430
Rat 431 CKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGS-YTCVATNQFGNGKSSGSL 494
Rat 495 IVKERTVITV------PPSKMD-------VTVGESIVLPCQVSHDPTMEVLFVWYFNGDVIDLKK 546
Rat 547 GVAHFERIGGESVGDLMIRNIQLGH-SGKYLCTVQ--------TTLERLSAVADIIVR------- 595
Rat 596 ----GPPGPPEDVKVEHISSTTSQLSW-RPGPDNNSPIQIFTIQ----TRTPFSVGWQAVATVPE 651
Rat 652 ILNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSE--------------LLRTKASIPNV 702
Rat 703 APVNI-NGGGGSRSELVITWEPIPEELQNG---EGFGYI--------IMFRP----------VGS 745
Rat 746 TTWMKEKVALVESSKFIYRNESI------------------MPLSPFEVKVGVYNNEG------- 785
Rat 786 -------------------EGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRN 831
Rat 832 TGRVLGYEVLYW---TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPP 893
Rat 894 VNV----TTKKSPPSQPPANIAWKLSNSKLCLNWEHVKTMENE-------SEVLGYKIL------ 941
Rat 942 -----YRQNRQSKTHVLETNNTSAELLVPF-----EEDYLIEIRT------VSDGGDGSSSEEIR 990
Rat 991 I 991 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cntn6 | NP_037357.1 | Ig strand D | 76..80 | CDD:409353 | 0/3 (0%) |
Ig strand E | 82..88 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 95..104 | CDD:409353 | 4/8 (50%) | ||
Ig strand G | 107..120 | CDD:409353 | 6/12 (50%) | ||
Ig | 129..214 | CDD:416386 | 24/85 (28%) | ||
Ig strand A | 130..135 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 139..145 | CDD:409353 | 0/5 (0%) | ||
Ig strand C | 153..159 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 164..166 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 171..176 | CDD:409353 | 3/5 (60%) | ||
Ig strand E | 179..183 | CDD:409353 | 3/3 (100%) | ||
Ig strand F | 193..201 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 203..214 | CDD:409353 | 0/10 (0%) | ||
Ig | 227..315 | CDD:416386 | 31/98 (32%) | ||
Ig strand A | 227..232 | CDD:409353 | 2/14 (14%) | ||
Ig strand A' | 235..240 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 243..252 | CDD:409353 | 4/8 (50%) | ||
Ig strand C | 258..262 | CDD:409353 | 1/3 (33%) | ||
Ig strand C' | 265..267 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 280..285 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 293..301 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 304..315 | CDD:409353 | 4/10 (40%) | ||
Ig | 319..403 | CDD:416386 | 13/83 (16%) | ||
Ig strand A | 319..322 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 326..330 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 334..342 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 348..353 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 355..358 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 363..367 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 369..374 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 383..390 | CDD:409353 | 0/6 (0%) | ||
Ig strand G | 394..403 | CDD:409353 | 0/8 (0%) | ||
Ig5_Contactin | 408..496 | CDD:409358 | 14/88 (16%) | ||
Ig strand B | 427..431 | CDD:409358 | 0/3 (0%) | ||
Ig strand C | 440..444 | CDD:409358 | 0/3 (0%) | ||
Ig strand E | 462..466 | CDD:409358 | 1/3 (33%) | ||
Ig strand F | 476..481 | CDD:409358 | 2/5 (40%) | ||
Ig strand G | 489..492 | CDD:409358 | 0/2 (0%) | ||
Ig | 500..598 | CDD:416386 | 30/130 (23%) | ||
Ig strand A' | 507..512 | CDD:409353 | 0/11 (0%) | ||
Ig strand B | 515..523 | CDD:409353 | 4/7 (57%) | ||
Ig strand C | 532..536 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 560..564 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 573..580 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 587..591 | CDD:409353 | 0/3 (0%) | ||
FN3 | 598..691 | CDD:238020 | 31/97 (32%) | ||
FN3 | 703..796 | CDD:238020 | 28/158 (18%) | ||
FN3 | 805..898 | CDD:238020 | 22/99 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 887..908 | 6/24 (25%) | |||
FN3 | 903..983 | CDD:214495 | 19/108 (18%) | ||
Ig | 26..120 | CDD:416386 | 30/105 (29%) | ||
Ig strand A | 27..31 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 34..39 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 45..53 | CDD:409353 | 1/7 (14%) | ||
Ig strand C | 58..64 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 66..69 | CDD:409353 | 1/2 (50%) | ||
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 30/105 (29%) |
I-set | 91..184 | CDD:254352 | 29/103 (28%) | ||
I-set | 190..279 | CDD:254352 | 27/110 (25%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 27/107 (25%) | ||
I-set | 283..370 | CDD:254352 | 29/86 (34%) | ||
Ig | 300..370 | CDD:299845 | 24/69 (35%) | ||
Ig | 388..>457 | CDD:299845 | 23/151 (15%) | ||
I-set | 479..561 | CDD:254352 | 22/87 (25%) | ||
Ig | 496..561 | CDD:143165 | 21/70 (30%) | ||
FN3 | 588..681 | CDD:238020 | 35/103 (34%) | ||
FN3 | <817..856 | CDD:238020 | 5/38 (13%) | ||
fn3 | 864..952 | CDD:278470 | 20/87 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |