| Sequence 1: | NP_037357.1 | Gene: | Cntn6 / 27256 | RGDID: | 62008 | Length: | 1028 | Species: | Rattus norvegicus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_649461.2 | Gene: | Cont / 40553 | FlyBaseID: | FBgn0037240 | Length: | 1390 | Species: | Drosophila melanogaster |
| Alignment Length: | 1019 | Identity: | 305/1019 - (29%) |
|---|---|---|---|
| Similarity: | 497/1019 - (48%) | Gaps: | 92/1019 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Rat 26 PIFIQEPQDVIFPLDLSR--SEIILSCTASGYPSPHYRWKQNGTDIDFSMTY---------HYRL 79
Rat 80 DGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLC 144
Rat 145 GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQG 209
Rat 210 PPTPLVQRTDG-----VMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPM 269
Rat 270 PGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYD 333
Rat 334 SLFWECKASGNPNPSYTWLKNGERLN----TEERIQTENGTLIITMLNV-SDSGIYQCAAENKYQ 393
Rat 394 TIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFF 458
Rat 459 LEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIV-KERTVITVPPSKMDVTVGESIVLPCQ 522
Rat 523 VSHDPTMEVLFVWYFNGDVIDLKKG-------VAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQ 580
Rat 581 TTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQA 645
Rat 646 VATVPEILNGQTY----NATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVN 706
Rat 707 INGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKFIYRNESIMPL 771
Rat 772 ----SPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNT 832
Rat 833 --GRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGTGPSS 891
Rat 892 PPVNVTTKKSPPSQPPANI-AWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLET 955
Rat 956 NNTSAELLVPFEE-------------DYLIEIRTVSDGGDGSSS 986 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cntn6 | NP_037357.1 | Ig | 26..120 | CDD:472250 | 36/104 (35%) |
| Ig strand B | 46..50 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 59..63 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 82..86 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 97..102 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 111..114 | CDD:409353 | 1/2 (50%) | ||
| Ig | 129..214 | CDD:472250 | 28/84 (33%) | ||
| Ig strand B | 140..144 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 154..158 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 179..183 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 193..198 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 209..212 | CDD:409353 | 2/2 (100%) | ||
| Ig | 227..315 | CDD:472250 | 29/88 (33%) | ||
| Ig strand B | 245..249 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 258..262 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 280..284 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 294..299 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 307..310 | CDD:409353 | 1/2 (50%) | ||
| Ig | 319..403 | CDD:472250 | 24/88 (27%) | ||
| Ig strand B | 335..339 | CDD:143205 | 0/3 (0%) | ||
| Ig strand C | 348..352 | CDD:143205 | 2/3 (67%) | ||
| Ig strand E | 369..373 | CDD:143205 | 1/3 (33%) | ||
| Ig strand F | 383..388 | CDD:143205 | 3/4 (75%) | ||
| Ig strand G | 396..399 | CDD:143205 | 0/2 (0%) | ||
| Ig5_Contactin | 408..496 | CDD:409358 | 27/87 (31%) | ||
| Ig strand A | 408..413 | CDD:409358 | 2/4 (50%) | ||
| Ig strand A' | 416..421 | CDD:409358 | 0/4 (0%) | ||
| Ig strand B | 425..432 | CDD:409358 | 2/6 (33%) | ||
| Ig strand C | 440..444 | CDD:409358 | 0/3 (0%) | ||
| Ig strand D | 458..461 | CDD:409358 | 1/2 (50%) | ||
| Ig strand E | 462..467 | CDD:409358 | 2/4 (50%) | ||
| Ig strand F | 475..483 | CDD:409358 | 5/7 (71%) | ||
| Ig strand G | 489..496 | CDD:409358 | 1/6 (17%) | ||
| Ig | 500..598 | CDD:472250 | 23/104 (22%) | ||
| Ig strand B | 517..521 | CDD:409353 | 2/3 (67%) | ||
| Ig strand C | 532..536 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 560..564 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 574..579 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 587..590 | CDD:409353 | 1/2 (50%) | ||
| FN3 | 598..691 | CDD:238020 | 36/96 (38%) | ||
| FN3 | <620..>912 | CDD:442628 | 96/306 (31%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 887..908 | 6/20 (30%) | |||
| FN3 | 903..983 | CDD:214495 | 21/93 (23%) | ||
| Cont | NP_649461.2 | CLECT | 139..>223 | CDD:214480 | |
| Ig | 361..466 | CDD:472250 | 36/104 (35%) | ||
| Ig strand B | 384..388 | CDD:409356 | 1/3 (33%) | ||
| Ig strand C | 397..409 | CDD:409356 | 3/12 (25%) | ||
| Ig strand E | 428..432 | CDD:409356 | 2/3 (67%) | ||
| Ig strand F | 443..448 | CDD:409356 | 2/4 (50%) | ||
| Ig strand G | 457..460 | CDD:409356 | 1/2 (50%) | ||
| Ig | 474..559 | CDD:472250 | 29/85 (34%) | ||
| Ig strand B | 485..489 | CDD:409392 | 0/3 (0%) | ||
| Ig strand C | 499..503 | CDD:409392 | 1/3 (33%) | ||
| Ig strand E | 523..527 | CDD:409392 | 2/3 (67%) | ||
| Ig strand F | 537..542 | CDD:409392 | 3/4 (75%) | ||
| Ig strand G | 553..556 | CDD:409392 | 2/2 (100%) | ||
| Ig_3 | 584..644 | CDD:464046 | 19/62 (31%) | ||
| Ig_3 | 660..738 | CDD:464046 | 21/77 (27%) | ||
| Ig | 756..844 | CDD:472250 | 27/87 (31%) | ||
| Ig strand B | 775..779 | CDD:409358 | 1/3 (33%) | ||
| Ig strand C | 788..792 | CDD:409358 | 0/3 (0%) | ||
| Ig strand E | 810..814 | CDD:409358 | 2/3 (67%) | ||
| Ig strand F | 824..829 | CDD:409358 | 3/4 (75%) | ||
| Ig strand G | 837..840 | CDD:409358 | 1/2 (50%) | ||
| Ig | <868..944 | CDD:472250 | 19/85 (22%) | ||
| Ig strand C | 881..885 | CDD:409359 | 1/3 (33%) | ||
| Ig strand E | 906..910 | CDD:409359 | 2/11 (18%) | ||
| Ig strand F | 920..925 | CDD:409359 | 2/4 (50%) | ||
| Ig strand G | 933..936 | CDD:409359 | 1/2 (50%) | ||
| FN3 | 944..1043 | CDD:238020 | 37/98 (38%) | ||
| FN3 | 1053..1146 | CDD:238020 | 28/95 (29%) | ||
| fn3 | 1156..1244 | CDD:394996 | 29/91 (32%) | ||
| fn3 | 1259..1346 | CDD:394996 | 22/93 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||