Sequence 1: | NP_037357.1 | Gene: | Cntn6 / 27256 | RGDID: | 62008 | Length: | 1028 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
Alignment Length: | 1077 | Identity: | 308/1077 - (28%) |
---|---|---|---|
Similarity: | 484/1077 - (44%) | Gaps: | 123/1077 - (11%) |
- Green bases have known domain annotations that are detailed below.
Rat 4 LWK--------LVILLPLINSCAG--ESRFTRPIFIQE---PQDVIFPLDLSRSE----IILSCT 51
Rat 52 ASGYPSPHYRWKQNGTDIDFSMTYHYRL----DGGSLAISSPRTDQDIGIYQCLATNPVGTILSR 112
Rat 113 KAKLQFAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQE--------- 168
Rat 169 DKRRFVSQNTGNLYIAKVEPSDVGN---YTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIE 230
Rat 231 VR-FPETIQ--AAKDSSVKLECFALGNPVPDISWRRLDGSPM--PGKVKYSNSQATLEIPKFQQE 290
Rat 291 DEGFYECVAGNLRGRNLAKGQLI--------FYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNP 347
Rat 348 SYTWLKNGERLN----TEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 408
Rat 409 DFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSD 473
Rat 474 AGSYTCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFN 538
Rat 539 GDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPED 603
Rat 604 VKVEHIS--STTSQLSWRPGPDNNSPIQIFTIQTRTPFS-VGWQAV-ATVPEILNGQTYNATVIG 664
Rat 665 LSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQ 729
Rat 730 NGEGFGYIIMF-RPVGSTTWMKEKVALVESSKFIYRNESIM-----PLSPFEVKVGVYNNEGEGS 788
Rat 789 LSTVSIV-YSGEDEPRLAPRG-TSVQSFSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESM 851
Rat 852 IGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSN 916
Rat 917 SKLCLNWEHVKTMENESEVLGYKILYR--------QNRQSKTHVLETNNTSAEL--LVPFEEDYL 971
Rat 972 IEIRTVSDGGDGSSSEEIRIPKMSSLSSVGVQILKPS 1008 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cntn6 | NP_037357.1 | Ig strand D | 76..80 | CDD:409353 | 1/7 (14%) |
Ig strand E | 82..88 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 95..104 | CDD:409353 | 5/8 (63%) | ||
Ig strand G | 107..120 | CDD:409353 | 3/12 (25%) | ||
Ig | 129..214 | CDD:416386 | 20/96 (21%) | ||
Ig strand A | 130..135 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 139..145 | CDD:409353 | 1/5 (20%) | ||
Ig strand C | 153..159 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 164..166 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 171..176 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 179..183 | CDD:409353 | 3/3 (100%) | ||
Ig strand F | 193..201 | CDD:409353 | 3/10 (30%) | ||
Ig strand G | 203..214 | CDD:409353 | 1/10 (10%) | ||
Ig | 227..315 | CDD:416386 | 22/100 (22%) | ||
Ig strand A | 227..232 | CDD:409353 | 0/4 (0%) | ||
Ig strand A' | 235..240 | CDD:409353 | 1/6 (17%) | ||
Ig strand B | 243..252 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 258..262 | CDD:409353 | 0/3 (0%) | ||
Ig strand C' | 265..267 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 276..279 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 280..285 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 293..301 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 304..315 | CDD:409353 | 3/18 (17%) | ||
Ig | 319..403 | CDD:416386 | 23/87 (26%) | ||
Ig strand A | 319..322 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 326..330 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 334..342 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 348..353 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 355..358 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 363..367 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 369..374 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 383..390 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 394..403 | CDD:409353 | 2/8 (25%) | ||
Ig5_Contactin | 408..496 | CDD:409358 | 34/87 (39%) | ||
Ig strand B | 427..431 | CDD:409358 | 1/3 (33%) | ||
Ig strand C | 440..444 | CDD:409358 | 0/3 (0%) | ||
Ig strand E | 462..466 | CDD:409358 | 2/3 (67%) | ||
Ig strand F | 476..481 | CDD:409358 | 3/4 (75%) | ||
Ig strand G | 489..492 | CDD:409358 | 0/2 (0%) | ||
Ig | 500..598 | CDD:416386 | 29/97 (30%) | ||
Ig strand A' | 507..512 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 515..523 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 532..536 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 560..564 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 573..580 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 587..591 | CDD:409353 | 1/3 (33%) | ||
FN3 | 598..691 | CDD:238020 | 34/96 (35%) | ||
FN3 | 703..796 | CDD:238020 | 25/99 (25%) | ||
FN3 | 805..898 | CDD:238020 | 24/93 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 887..908 | 6/20 (30%) | |||
FN3 | 903..983 | CDD:214495 | 22/89 (25%) | ||
Ig | 26..120 | CDD:416386 | 33/104 (32%) | ||
Ig strand A | 27..31 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 34..39 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 45..53 | CDD:409353 | 3/11 (27%) | ||
Ig strand C | 58..64 | CDD:409353 | 3/5 (60%) | ||
Ig strand C' | 66..69 | CDD:409353 | 1/2 (50%) | ||
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | 28/74 (38%) |
IG_like | 57..127 | CDD:214653 | 27/71 (38%) | ||
Ig | 135..214 | CDD:299845 | 19/85 (22%) | ||
IG_like | 141..216 | CDD:214653 | 18/81 (22%) | ||
ig | 251..332 | CDD:278476 | 19/82 (23%) | ||
I-set | 339..427 | CDD:254352 | 25/94 (27%) | ||
Ig | 354..427 | CDD:299845 | 22/73 (30%) | ||
I-set | 432..517 | CDD:254352 | 34/87 (39%) | ||
Ig | 446..517 | CDD:299845 | 29/71 (41%) | ||
I-set | 522..611 | CDD:254352 | 26/92 (28%) | ||
ig | 525..609 | CDD:278476 | 24/87 (28%) | ||
FN3 | 613..707 | CDD:238020 | 35/101 (35%) | ||
FN3 | 716..807 | CDD:238020 | 24/97 (25%) | ||
fn3 | 817..905 | CDD:278470 | 23/87 (26%) | ||
FN3 | 917..1004 | CDD:238020 | 22/89 (25%) | ||
FN3 | 1041..1111 | CDD:238020 | |||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3513 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |