DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR162 and dop-4

DIOPT Version :9

Sequence 1:NP_062832.1 Gene:GPR162 / 27239 HGNCID:16693 Length:588 Species:Homo sapiens
Sequence 2:NP_508238.2 Gene:dop-4 / 183715 WormBaseID:WBGene00016872 Length:517 Species:Caenorhabditis elegans


Alignment Length:253 Identity:53/253 - (20%)
Similarity:107/253 - (42%) Gaps:28/253 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    17 ALSWLACGLLALLANAWIILSISAKQQKHKPLELLLCFLAGTHILMAAVPLTTFAVVQLRRQASS 81
            |::..:..||.:..|..:::::..|:....|...|:..||...:::..:.:...::.::     :
 Worm    46 AIALFSICLLTVAGNCLVVIAVCTKKYLRNPTGYLIISLAIADLIVGVIVMPMNSLFEI-----A 105

Human    82 DYDW--NESICKVFVSTYYTLALATCFTVASLSYHRMWMVRWPVNYRLSNAKKQALHAVMGIWMV 144
            ::.|  ...:|.||.:.....:.|:.:.:..:|..|....:.|:.||...:|::.|.|::.:|::
 Worm   106 NHTWLFGLMMCDVFHAMDILASTASIWNLCVISLDRYMAGQDPIGYRDKVSKRRILMAILSVWVL 170

Human   145 SFILSTLPSIGWHNNGERYY--ARGCQFIVSKIGLGFGVCFSLLLLGGIVMGLVCVAITFYQTLW 207
            |.|||....|.|..:....|  ...|.|..||:    .|.||.|:...|.:.|:..|   |..::
 Worm   171 SAILSFPGIIWWRTSSPHLYEDQSQCLFTDSKM----YVSFSSLVSFYIPLFLILFA---YGKVY 228

Human   208 ARPRRARQARRVG---------GGGGTKAGGPGALGTRPAFEVPAIVVEDARGKRRSS 256
            ....|..:..|:|         .|..:.......|.:.   ..|.:.:...|||:.||
 Worm   229 IIATRHSKGMRMGIKTVSIKKRNGKKSNTETESILSSE---NEPTLRIHFGRGKQSSS 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR162NP_062832.1 7tm_1 34..>207 CDD:278431 38/176 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..474
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 511..550
dop-4NP_508238.2 7tm_4 53..>245 CDD:304433 44/203 (22%)
7tm_1 59..463 CDD:278431 50/240 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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