DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPKOW and cwf28

DIOPT Version :10

Sequence 1:XP_054182812.1 Gene:GPKOW / 27238 HGNCID:30677 Length:491 Species:Homo sapiens
Sequence 2:NP_596659.1 Gene:cwf28 / 2540302 PomBaseID:SPBC3B9.02C Length:381 Species:Schizosaccharomyces pombe


Alignment Length:421 Identity:85/421 - (20%)
Similarity:133/421 - (31%) Gaps:161/421 - (38%)


- Green bases have known domain annotations that are detailed below.


Human     1 MELQQAARRPGKRSKMADSKEGVLPLTAASTAPISFGFTRTSARRRLADSG--DGAGPSPEEKDF 63
            ||.::|  |..|:......|...||     .:.:::|.....|....||:.  |....:..||..
pombe    65 MEKRKA--RFKKKETEVHEKPSQLP-----DSGLNYGLNIRVASSSAADNEIVDWKANNSNEKAQ 122

Human    64 LKTVEGRELQSVKPQEAPKELVIPLIQ------NGHRRQPPARPPGPSTDTGALADGVVSQAVKE 122
            .|....:|...:.|:|.  :||:..:.      |....||                 :.:..|.|
pombe   123 NKIATNKESTDILPEEV--QLVLNDLNDDVKSANSANLQP-----------------ITTNVVNE 168

Human   123 LIAESKKSLEERENAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEAN---YEAVPVEAYGL 184
            ..| .:|.::|                                  :||.:|   |..:|||.:|.
pombe   169 KDA-YRKDIDE----------------------------------LPEPSNMKDYSEIPVEEFGA 198

Human   185 AMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGA-----NLTEAQ--------ALTPTGP- 235
            ||||||||.........|:      ||. ||..||:||     .|||..        ...|..| 
pombe   199 AMLRGMGWNGQLSSKDAFD------VNQ-RPTFLGMGAKPVDSELTELDIWKNPKKTMFLPVKPL 256

Human   236 ---SRMPRPDEEQEKDKEDQPQGLVPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSRVV 297
               |.:...:|..|..|:.                      ..::.|.|                
pombe   257 ESNSALNSQNEHTEVQKKS----------------------NSIDNLTP---------------- 283

Human   298 TVSEYYLRPVSQQEFDKNTLDLR-QQNGTASSRKTLWNQELYIQQD-----------NSERKRKH 350
                      |.:.|.|.:.|.. .:..:.||:...:|...|.::|           :|||:::|
pombe   284 ----------SSELFRKRSRDNNLSRESSVSSKHLDYNSRNYNKRDRDPDRTKYREYHSERRKQH 338

Human   351 LPDR-----QDGPAAKSEKAAPRSQHWLHRD 376
            ..||     ..|.:...:|.:.||..:..|:
pombe   339 RTDRYSDDYYQGRSYSYKKRSHRSDRYTERE 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPKOWXP_054182812.1 G-patch_2 169..223 CDD:432700 25/61 (41%)
KOW_GPKOW_A 259..315 CDD:240516 4/55 (7%)
KOW_GPKOW_B 434..484 CDD:240517
cwf28NP_596659.1 G-patch_2 180..233 CDD:432700 25/59 (42%)
SF-CC1 264..>378 CDD:273721 25/154 (16%)
Blue background indicates that the domain is not in the aligned region.

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