DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPC3 and dlp

DIOPT Version :10

Sequence 1:NP_001158089.1 Gene:GPC3 / 2719 HGNCID:4451 Length:603 Species:Homo sapiens
Sequence 2:NP_524071.2 Gene:dlp / 39596 FlyBaseID:FBgn0041604 Length:765 Species:Drosophila melanogaster


Alignment Length:678 Identity:142/678 - (20%)
Similarity:261/678 - (38%) Gaps:128/678 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     2 AGTVRTACLVV------AMLLSLDFPG--QAQPPPPPPDA----------------------TCH 36
            |....||.||:      .:||:...|.  ||...|.|..|                      .|.
  Fly    17 ATATTTARLVIFSSPLLLLLLTTHLPPTLQADNGPAPQVAALAAPNPAGGVAGSSIIDQFSPNCS 81

Human    37 QVRSFFQRLQPGLKWVPETPVPGSDLQVC-LPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMEL 100
            .|...||........:|:.|.....|:.| .|...|||:..||.:..:.:|..:|...:.....:
  Fly    82 AVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLEGHTKDQISRM 146

Human   101 KFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDIN--- 162
            ..::...|..|::.|..:::.::...|:||...|..:..:......:.|.::..|.....::   
  Fly   147 SGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFKELETYFANGRVDLLE 211

Human   163 -VDDMVNELFDSLFPVIYTQLMNPGLPDSALDIN--ECLRGARRDLKVFGNFPKLIMTQVSKSLQ 224
             :|...|.|:..:|.|:.||.        ..|.|  .|:....::||.||:.|..:..|:.:|..
  Fly   212 VMDKFFNTLYQKMFTVLNTQY--------TFDENYMRCVSEHMKELKPFGDVPDKLSVQIKRSFV 268

Human   225 VTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGV 289
            .||.:.|||....||.....:::.:.||...||:|.:|..|:| ...|||..||..|::||:...
  Fly   269 ATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKG-YTEKPCTNYCVNVIKGCLHYQ 332

Human   290 VEIDKYWREYILSLEELVNGMYRIYDMENVLLGLFSTIHDSIQYVQKNAGKLTTTETE------- 347
            .|.|..|..:.::::::...:...:::..|:..|...|.::|...|.:...:|....:       
  Fly   333 HEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIMNFQDSGQDITNRVFQGCGRPKL 397

Human   348 KK-------------IWHFKYPIFFLCIGLDLQIGKLCAHSQQR------QYRSAYYPEDLFIDK 393
            ||             |.:.:.|:....:.:|..:.:.....::|      |..||...::..:.|
  Fly   398 KKMKRSISPKLQGVQILNARSPVEADTLDIDETLDEAIVLRERRAAEPGSQETSAQQSQEQGVGK 462

Human   394 -------------------KVLKVAHVE-----------------HEETLSSRRRELIQKLKSFI 422
                               |..:....:                 .|..|....|::.|::|.:.
  Fly   463 SGNGGGGGGGNNRRQQQRRKQQQQRRKQQNNRDDNDDDDNESGGGREPILDRIVRDIRQRVKDYK 527

Human   423 SFYSALPGYICSHSPVAEN---DTLCWNGQELVERYSQK-AARNGMKNQFNLHELKMKGPEPVVS 483
            .|:|.||..:||:..:|.:   |.:|||| ..::||... ...:|...:|..:....|    ..:
  Fly   528 KFWSNLPHSVCSNEDIASSSDVDGMCWNG-HTIDRYMHSITTEHGSNPEFTGNPASTK----QTA 587

Human   484 QIIDKLKHI-NQLLRTMSMPKGRVLDKNLDEE------GFESGDCGDDEDECIGGSGDGMIKVKN 541
            |:..:|.|: |.::...:...|:.::.:..||      |..||...:|:::...|||.|..:..:
  Fly   588 QMASQLSHLKNAIVHLRNAYNGQDVEWSEQEELPYAGSGAGSGSGSEDDEDDDEGSGLGPFEPSH 652

Human   542 QLRFLAELAYDLDVD---DAPGNSQQAT 566
            : ..:...:.|.|.|   ||.|.....|
  Fly   653 K-PDVERPSVDADNDDDEDAGGRGHMPT 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPC3NP_001158089.1 Glypican 14..600 CDD:460084 137/660 (21%)
dlpNP_524071.2 Glypican 79..619 CDD:460084 112/553 (20%)

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