DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPC3 and dally

DIOPT Version :9

Sequence 1:NP_001158089.1 Gene:GPC3 / 2719 HGNCID:4451 Length:603 Species:Homo sapiens
Sequence 2:NP_001246685.1 Gene:dally / 39013 FlyBaseID:FBgn0263930 Length:626 Species:Drosophila melanogaster


Alignment Length:568 Identity:132/568 - (23%)
Similarity:220/568 - (38%) Gaps:131/568 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    35 CHQVRSFFQRLQPGLKWVPETPVPGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASME 99
            |..|:|:|:.:.     :..:........:|   |..||:...|.:.:..|....||||...:..
  Fly    69 CDAVKSYFESID-----IKSSGTYSEKGAIC---GGNCCNNATELELRDKAAGMFEQLLHHHTSS 125

Human   100 LKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYI-------- 156
            |:.::..||..||.....:.:.::|.|:::|...|..:.|.:...:.:.:|::..::        
  Fly   126 LRGVLETNAKQFQSHVLELAQISENMTHSLFSKVYTRMVPSSRMMIHQLYTEIMNHLIYTSNYTN 190

Human   157 ---------LGS-DINVDDMVNELFDSLFPVIYTQLMN---PGLPDSALDINECLRGARRDLKVF 208
                     :|| ..|:::.|...|..||||.|.|:::   ..|.|...|...||:....::..|
  Fly   191 SNGQLGRRGIGSVQSNLEEAVRHFFVQLFPVAYHQMVHLSKNNLGDLHEDYVNCLQHNFDEMHPF 255

Human   209 GNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHL---KFSKDCGRMLTRMWYCSYCQG--- 267
            |:.|:.:.:.:.||:.::.:|:.||....||::..|.|   :.:..|...|.:|.||..|.|   
  Fly   256 GDIPQQVQSNLGKSVHMSNVFMNALLQAAEVLSEADALYGEQLTDTCKLHLLKMHYCPNCNGHHS 320

Human   268 --LMMVKPCGGYCNVVMQGC---MAGVVEIDKYWREYILSLEELVNGMYRIYD--MENVLLGLFS 325
              ....|.|.|||..||:||   .||:  :|..|...:.||..||. .:.:.|  :.||:..|.:
  Fly   321 SSRSETKLCYGYCKNVMRGCSAEYAGL--LDSPWSGVVDSLNNLVT-THILSDTGIINVIKHLQT 382

Human   326 TIHDSIQYVQKNAGKLTTTETEKKIWHFKYPIFFLCIGLDLQIGKLCAHSQQRQYRS-------- 382
            ...::|.....|.     .|.|||                  :.|.|.......|.|        
  Fly   383 YFSEAIMAAMHNG-----PELEKK------------------VKKTCGTPSLTPYSSGEPDARPP 424

Human   383 --------AYYPED---LFIDKKVLKVAHVEHEETLSSRRRELIQKLKSFISFYSALPGYICSHS 436
                    |..|:.   ||:                     ..|.|.|   .||:.:....|...
  Fly   425 PHKNNVKWATDPDPGMVLFL---------------------STIDKSK---EFYTTIVDNFCDEQ 465

Human   437 PVAENDTLCWNGQELVERYSQKAARNGMKNQ-------FNLHELKMKGPEPVVSQIIDKL----K 490
            ..:.:|..||:|....: |:|.....|..:|       ||     .|.....:::::|||    |
  Fly   466 QHSRDDHSCWSGDRFGD-YTQLLINPGTDSQRYNPEVPFN-----AKAQTGKLNELVDKLFKIRK 524

Human   491 HINQLLRTMSMPKGRVLDKNLDE-EGFESGDCGDDEDECIG--GSGDG 535
            .|.....:.|:.....:..::.| .|...|..||||:|..|  |||||
  Fly   525 SIGAAAPSNSIQATHDIQNDMGEGSGGGEGQIGDDEEEYGGAHGSGDG 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPC3NP_001158089.1 Glypican 14..600 CDD:279494 132/568 (23%)
dallyNP_001246685.1 Glypican 51..622 CDD:279494 132/568 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147853
Domainoid 1 1.000 186 1.000 Domainoid score I3356
eggNOG 1 0.900 - - E1_KOG3821
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097767at2759
OrthoFinder 1 1.000 - - FOG0003365
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10822
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.810

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