Sequence 1: | NP_055257.2 | Gene: | SIGLEC8 / 27181 | HGNCID: | 10877 | Length: | 499 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001348166.1 | Gene: | si:ch73-380l3.2 / 100003913 | ZFINID: | ZDB-GENE-080303-1 | Length: | 266 | Species: | Danio rerio |
Alignment Length: | 223 | Identity: | 57/223 - (25%) |
---|---|---|---|
Similarity: | 93/223 - (41%) | Gaps: | 35/223 - (15%) |
- Green bases have known domain annotations that are detailed below.
Human 25 DGYLLQVQELVTVQEGLCVHVPCSFSYP-QDGWTDSDPVHGYWFRA---------GDRPYQDAPV 79
Human 80 ATNNPDREVQAETQGRFQLLGDIWSNDCSLSIRDARKRDKGSYFFRLERGSMKWSYKSQLNYKTK 144
Human 145 QLSVFVTALTHRPDILILGTLESGHSRNLTCSVPWACKQGTPPMISW--IGASVSS-----PGPT 202
Human 203 TARSSVLTLTPKPQDHGTSLTCQVTLPG 230 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SIGLEC8 | NP_055257.2 | Ig | 27..151 | CDD:299845 | 31/133 (23%) |
Carbohydrate binding. /evidence=ECO:0000269|PubMed:27357658, ECO:0007744|PDB:2N7B | 72..75 | 0/2 (0%) | |||
Carbohydrate binding. /evidence=ECO:0000269|PubMed:27357658, ECO:0007744|PDB:2N7B | 134..138 | 1/3 (33%) | |||
Ig | 171..229 | CDD:299845 | 22/64 (34%) | ||
IG_like | 269..344 | CDD:214653 | |||
IGc2 | 275..335 | CDD:197706 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 410..443 | ||||
ITIM motif | 445..450 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 451..470 | ||||
SLAM-like motif | 468..473 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 478..499 | ||||
si:ch73-380l3.2 | NP_001348166.1 | Ig | 24..141 | CDD:325142 | 31/132 (23%) |
Ig | 148..226 | CDD:325142 | 24/79 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 74 | 1.000 | Inparanoid score | I12412 |
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12035 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X34 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.060 |