DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLA and gana-1

DIOPT Version :10

Sequence 1:NP_001393676.1 Gene:GLA / 2717 HGNCID:4296 Length:470 Species:Homo sapiens
Sequence 2:NP_506031.1 Gene:gana-1 / 179660 WormBaseID:WBGene00011095 Length:451 Species:Caenorhabditis elegans


Alignment Length:440 Identity:174/440 - (39%)
Similarity:236/440 - (53%) Gaps:55/440 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    28 GARALDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISWSFALVAQAGVQCHDLGSPQPPPPRFK 92
            ||..|||||.|||.|||:.|..|.|.:||.:.|..||                            
 Worm    12 GAFCLDNGLGRTPPMGWMSWTAFYCEIDCVKHPTGCI---------------------------- 48

Human    93 QFSCLILASSWNYSEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHG 157
                         :|:|:.:||:.:||.|:...||:.:.|||||...:|||.|.|.|:..|||.|
 Worm    49 -------------NEQLYKDMADQLVSGGYDKVGYKSVHIDDCWSEMERDSHGILVANKTRFPSG 100

Human   158 IRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLA 222
            ::.||.|:|.:|||.|||.|.|.|||.|:|||:.:..:||||||.|.||.||.|||..|. ..:.
 Worm   101 MKALAKYMHDRGLKFGIYEDYGTKTCGGYPGSYKHEKVDAQTFAAWDVDYLKLDGCNIDQ-AMMP 164

Human   223 DGYKHMSLALNRTGRSIVYSCEWPLYMWPFQKP---NYTEIRQYCNHWRNFADIDDSWKSIKSIL 284
            .||......||.|||.|:|||.||.|:  ...|   ||..|.:|||.||||.||:.|||||.||:
 Worm   165 IGYPLFEKELNETGRPIMYSCSWPAYL--IDHPELVNYNLIGKYCNTWRNFDDINSSWKSIISII 227

Human   285 DWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAK 349
            .:....|::.:...|||.|:|||||||||.|::.:..::|..:|.|.:|||.||||||.|....|
 Worm   228 SYYDKMQDKHIPTHGPGKWHDPDMLVIGNKGITLDMSISQFTVWCIWSAPLIMSNDLRIIGDSFK 292

Human   350 ALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWER---PLSG--LAWAVAMINRQEIGGPRSYTIA 409
            .:|::|:.|.|||||||..|..::...:..|:.:   |..|  .::|.|.:||.|..|.:...|.
 Worm   293 DVLKNKEAIKINQDPLGIMGRLIKNSTDIGVYVKQITPSKGDKKSFAFAYLNRNEKEGYKRIEIQ 357

Human   410 VASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLE 459
            :||:|   ..:||.:....:.....||.......:...|.|.|:|..:.:
 Worm   358 LASIG---LTDPAGYYVHDIWSHVDLGLLRSGDSIVVSIAPAGSVFFRAD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLANP_001393676.1 Melibiase_2 39..363 CDD:374582 139/326 (43%)
Melibiase_2_C 366..452 CDD:407508 21/90 (23%)
gana-1NP_506031.1 AmyAc_family 23..306 CDD:476817 139/326 (43%)
Melibiase_2_C 309..397 CDD:407508 21/90 (23%)

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