DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SALL3 and salr

DIOPT Version :9

Sequence 1:NP_741996.2 Gene:SALL3 / 27164 HGNCID:10527 Length:1300 Species:Homo sapiens
Sequence 2:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster


Alignment Length:1363 Identity:392/1363 - (28%)
Similarity:547/1363 - (40%) Gaps:351/1363 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    95 PEPSPASSPSERAESEAAEEAGAEGAEGEARPVEKEAEPMDAEPAGDTRAPRPPPAAPAPPTPAY 159
            |:....:.|....|.|.|||.|            :|.||.::..|.|............|     
  Fly    61 PQMEAEAVPESDTERETAEERG------------EEQEPENSNEALDLSLISSGGRESLP----- 108

Human   160 GAPSTNVTLEALLSTKVAVAQFSQGARAAGGSGAGGGVAAAAVPLILEQLMALQQQQIHQLQLIE 224
              .|.:|:||||..||||||||:..|.|       |...:|.:.::...:..:|:|.:.|||||:
  Fly   109 --GSGHVSLEALQHTKVAVAQFAATAMA-------GNHQSADLAMVQSTIFNVQRQHLMQLQLIQ 164

Human   225 QIRSQVALMQRPPPRPSLSPAAA------------PSAPGPAPSQLPGLAALPLSAGAPAAAIAG 277
            .::||:          ..:.|||            ...|.|.|.:.|       :.|........
  Fly   165 HLQSQL----------KRAEAAALGRHSHSDEEEEEPEPEPEPKKQP-------TNGLKEELELE 212

Human   278 SGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSAST 342
            .||.:    |..|...|.|:..:...|..:      ..|.|............|.|||...:...
  Fly   213 QGPES----EQDQESRREENSKTDKRGTED------RKAEPEGYQSMMCDISSSLASSIITNHDP 267

Human   343 PPALAPGSLLGAAPGLPSPLLPQTSASGVIFPNPLVSI-AATANALDPLSALMKHRKGKPPNVSV 406
            |||             |:.            ||.|..: ..|...||..|..: |........|.
  Fly   268 PPA-------------PNE------------PNCLEMLQRRTEEVLDSASQSL-HAAQMQEEYSE 306

Human   407 FEPK-ASAEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRH 470
            :..| |.:....|||:|::|.|:|||.||||||||||||||||.||:||::|:||||||||:|||
  Fly   307 YASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRH 371

Human   471 KEKYPHIQMNPYPVPEYLDNV-----PTCSGIPYGMSL---PPEKPVTTWLDSKPVLPTVPTSVG 527
            .:.:|.:.:.|...|    ||     ....|..|.:.|   ||..||........|  ..|..:.
  Fly   372 TQIFPPMLLPPGVAP----NVGHSGQGQVQGEQYPIRLPFAPPVAPVGQEQHQNQV--EEPEEIR 430

Human   528 LQLPPTVPGAHGYA------DSPSATPASRSPQRPSPASSECASLSPGLNHVESGVSATAESPQS 586
            .::|  ||.|...:      ...|.:|..| .:.|....::.|..|             :|.|:.
  Fly   431 QEIP--VPQAEDLSKPMVKEKEKSHSPVER-VKTPKEVKTDAALPS-------------SEKPEK 479

Human   587 LLGGPPLTKAEPVSLPCTNARAGDAPVGAQASAAPTSVDG--------------APTSLGSPGLP 637
            .:..|.:|         ::.|.|.......::.:|...|.              ..:|......|
  Fly   480 EISKPVVT---------SSRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKLVRRSSASRESQP 535

Human   638 AVSEQFKAQF------PFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKM 696
            |  |...||.      .:..|::..:|||||||||||:||:.|:||||||:.|.:|:||:|:|:|
  Fly   536 A--EYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQM 598

Human   697 HYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMH 761
            |.|||||||||:||||||||.||||||.|..:|:.|||:|.|..||:|.:||:|.::||||||:|
  Fly   599 HIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIH 663

Human   762 -----MGGQ-IP---------------NTPLPEGFQDAMDSELAYDDKNAETLSS-----YDDDM 800
                 .||| .|               |:....|..|.:|......|.:.:...|     :|:.|
  Fly   664 TMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFM 728

Human   801 DENSMEDDAELKDAATDPAKPLLSYAGSCPPSPPSVISSIAALENQMKMIDSVMSCQQLTGLKSV 865
            ..:|.:|..:...|||            ..|.|         ||.:.                  
  Fly   729 TMDSTDDSRDNSSAAT------------ATPHP---------LERER------------------ 754

Human   866 ENGSGESDRLSNDSSSAVGDLESRSAGSPAL----SESSSSQAL---SPAPSNGESF-------- 915
            :.......|:.||.|      :.||..:|.|    |||....|:   ||:.::|..|        
  Fly   755 DREKERERRIPNDCS------DERSHSNPDLTGGRSESGEMPAMDLSSPSSNSGRIFATGLANGA 813

Human   916 ------RSKSPGLGAPEEPQEIPLKTERPDSPAAAPGSGGAPGRAGIKEEAPFSLLFLSRERGKC 974
                  ....|.||.|..|..:.:...|.:..|.    |.|..:..:....|...:.|..     
  Fly   814 AGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHAL----GHAHAKFPLLPFGPLGFMGLHP----- 869

Human   975 PSTVCGVCGKPFACKSALEIHYRSHTKERPFVCALCRRGCSTMGN-------LKQHLLTHR---- 1028
            |..||.:|.|.....:|||.|.:|...:.|......|..||..|:       |..:|...:    
  Fly   870 PPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDAGSPYGAKLTLNPNLFAKKPPSS 934

Human  1029 --------------------------LKELPSQ---LFDPNFALGPSQST------PSLISSAAP 1058
                                      :||.|.|   :.:...:.|....|      |.....|..
  Fly   935 SSSSSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDAEQ 999

Human  1059 TMIKMEVNGHGKAMALGEGPPLPAGVQVPAGP----QTVMGPGLAPMLAPPPRRTPKQHNCQSCG 1119
            :::||:::.|                :.||.|    |.:|..|.......||  ...:|.|..|.
  Fly  1000 SLMKMQLHAH----------------RFPASPLDFQQALMSAGPPTSSLDPP--VNNKHFCHVCR 1046

Human  1120 KTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPM-- 1182
            :.|||:||||||.|||||:|||.|.:|.:|||||||||||||||||.|..:|||||:|:|.||  
  Fly  1047 RNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRP 1111

Human  1183 ALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGIPQLPVSLGG 1247
            ....|.....|...|:.:..|     |..:..|.....|||..|..|:|......||..|.:.||
  Fly  1112 GPNSGQGHPGSSAEQEFMQRR-----PELFFPYLPPFFNGLPPKPGELSPGAFPNIPPPPFANGG 1171

Human  1248 S-ALPP-----LGSMASG---MDKARTGSSP-PIVSLDKASSETAAS----RPFTRF-IEDNK 1295
            . ..||     .|.:|..   :::..:..|| |..:...|..|...|    .|.:|. :|:|:
  Fly  1172 KYPYPPGLLGFPGFLAQHPYILERRSSSKSPTPEPAQSPALREEEGSGNIWHPLSRIKVENNQ 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SALL3NP_741996.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..162 14/66 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..258 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..352 16/74 (22%)
COG5048 412..>734 CDD:227381 134/355 (38%)
C2H2 Zn finger 422..442 CDD:275368 14/19 (74%)
C2H2 Zn finger 450..470 CDD:275368 14/19 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..633 20/129 (16%)
C2H2 Zn finger 681..701 CDD:275368 10/19 (53%)
zf-H2C2_2 693..718 CDD:316026 20/24 (83%)
C2H2 Zn finger 709..729 CDD:275368 15/19 (79%)
zf-C2H2 739..761 CDD:306579 12/21 (57%)
C2H2 Zn finger 741..761 CDD:275368 12/19 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 864..955 25/111 (23%)
C2H2 Zn finger 979..999 CDD:275368 7/19 (37%)
C2H2 Zn finger 1007..1027 CDD:275368 6/26 (23%)
zf-C2H2 1113..1135 CDD:306579 13/21 (62%)
C2H2 Zn finger 1115..1135 CDD:275368 12/19 (63%)
zf-H2C2_2 1127..1152 CDD:316026 17/24 (71%)
C2H2 Zn finger 1143..1163 CDD:275368 15/19 (79%)
zf-C2H2 1143..1163 CDD:306579 15/19 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1259..1279 4/23 (17%)
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 15/21 (71%)
C2H2 Zn finger 323..343 CDD:275368 14/19 (74%)
zf-H2C2_2 335..360 CDD:290200 20/24 (83%)
C2H2 Zn finger 351..371 CDD:275368 14/19 (74%)
C2H2 Zn finger 583..603 CDD:275368 10/19 (53%)
zf-H2C2_2 595..620 CDD:290200 20/24 (83%)
C2H2 Zn finger 611..631 CDD:275368 15/19 (79%)
C2H2 Zn finger 643..663 CDD:275368 12/19 (63%)
lambda-1 1013..>1061 CDD:212564 19/49 (39%)
zf-C2H2 1040..1062 CDD:278523 13/21 (62%)
C2H2 Zn finger 1042..1062 CDD:275368 12/19 (63%)
zf-H2C2_2 1054..1079 CDD:290200 17/24 (71%)
C2H2 Zn finger 1070..1090 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7769
eggNOG 1 0.900 - - E1_KOG1074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47594
OrthoDB 1 1.010 - - D130294at33208
OrthoFinder 1 1.000 - - FOG0001008
OrthoInspector 1 1.000 - - otm40936
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23233
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X498
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
109.890

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