DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHIA and Cht5

DIOPT Version :9

Sequence 1:NP_970615.2 Gene:CHIA / 27159 HGNCID:17432 Length:476 Species:Homo sapiens
Sequence 2:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster


Alignment Length:561 Identity:178/561 - (31%)
Similarity:254/561 - (45%) Gaps:119/561 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    21 AYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNNEITTIEWNDVTL--------- 76
            |.::.|||:|||.||.|:||:..:::...||||:||:|.|     :....|:.:.:         
  Fly    26 ASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIG-----VNDKSWDVLVIDPELDVDQG 85

Human    77 -YQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWE 140
             :..|..||..|..:|..:|:|||..|.:.::.||:..:.||:||.||::|::||.|||.|.|||
  Fly    86 GFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVVRFMKQYNFDGFDLDWE 150

Human   141 YPGS--RGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQY 203
            |||:  ||....||..|...|:|:|.||::|.:...     :|.||......:..||.:|:|.:.
  Fly   151 YPGATDRGGNYGDKDKFLYFVEELRRAFDREGRGWE-----ITMAVPVAKFRLNEGYHVPELCEA 210

Human   204 LDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYG 268
            ||.||.|||||.|:|.|:...:|||||...|..:...|||:..:..|::.|.||.||:||.|.||
  Fly   211 LDAIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGLALWEEMGCPANKLVVGVPFYG 275

Human   269 HNFILSNPS-NTGIGA---PTSGAGPAGPYAKESGIWAYYEICTFL---KNGATQGWDAPQEVPY 326
            ..|.|||.: |..:|.   ..:|.|..|||...||..|||||||.:   ..|.|..||....|||
  Fly   276 RTFTLSNSNKNYNMGTYINKEAGGGAPGPYTNASGFLAYYEICTEVMDKSKGWTVEWDDAGMVPY 340

Human   327 AYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTG-----------TFCNQGKF--- 377
            .|:...||||:|..|..||..::|...:.|||.||||:|||.|           .:.|...:   
  Fly   341 TYKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHGMCGRKNGLTQILYDNMKNYRVP 405

Human   378 -PLISTLKK----------------ALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSG 425
             |...|..:                |:...:.|.|...:|....|::|....:..|...:.|||.
  Fly   406 EPTRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTKRPKPKPKPTSSPLSPTSAPGPVPTVGSST 470

Human   426 --------------------------------------------------GSGF------CAVRA 434
                                                              |..|      |..|.
  Fly   471 PKPTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVYPVDPVEPTDPEQPMGPQFDPNEIDCTNRD 535

Human   435 NGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 475
            ...:|   |...::.||:|...:..|:.|..|.|..:.|:|
  Fly   536 FVPHP---NCRKYFRCVHGKPVEFECKEGTAFHTVLNVCDW 573

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CHIANP_970615.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 152/412 (37%)
Glyco_18 26..365 CDD:214753 145/357 (41%)