DRSC/TRiP Functional Genomics Resources

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Protein Alignment FOXP1 and fkh-7

DIOPT Version :10

Sequence 1:NP_001231739.1 Gene:FOXP1 / 27086 HGNCID:3823 Length:693 Species:Homo sapiens
Sequence 2:NP_001023147.1 Gene:fkh-7 / 177340 WormBaseID:WBGene00001439 Length:778 Species:Caenorhabditis elegans


Alignment Length:833 Identity:214/833 - (25%)
Similarity:325/833 - (39%) Gaps:258/833 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    11 SNGSAIQNGSGGSNHLLECGGLREGRSNGETPAVDIGAADLAHAQQQQQQALQVARQLLLQQQQ- 74
            |:.|.:.:.:..:||||               |.|....|:.| :::::...::..::.:|.:. 
 Worm    17 SSTSTVTSPTSQNNHLL---------------AEDEEQIDVVH-EEEEEDMEEMKMEIEMQSKSL 65

Human    75 QQQVSGLK-----------------------------SPKRNDK----------QPALQVPVSVA 100
            .|:.|||:                             .|..:|.          :||..:|..  
 Worm    66 HQKPSGLRRSFRPLIASELRSGGIHKTSSDSNLKRLAGPSSSDSAGTSGYGYLPRPASNLPAG-- 128

Human   101 MMTPQVITPQQMQQILQQQVLSP-QQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHA 164
                          |..:..:.| |.:|..||..|:|| ....:.....|      |.:.:.||.
 Worm   129 --------------INHEFKIDPLQTVQQFLQMHQSLM-NSPSVPTCLSK------LLIDEDQHN 172

Human   165 GKQPKEQQQVATQQLAFQQQLLQMQQLQQ------------QH--------------LLSLQRQG 203
            .:.......|....:...:.|.:..|.|.            .|              ||:||.: 
 Worm   173 HQSTTTLNNVLAPPMITSESLPRPTQAQSFANSTIGGGANTSHLPVTLDTGINDNLILLALQER- 236

Human   204 LLTIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGNNHSSLDLTTTCVSS------- 261
              .::|.||.     |.|......|..|     :|.|...|...:..|.| ||..:..       
 Worm   237 --LMRPQQPT-----LTQSATTPSLSHL-----AAATNSSTNATSLGSAD-TTRLIQQMFLGQML 288

Human   262 --SAPSKTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFL 324
              ..|:...|     |||....|:..|.:.::........|.|:.||:|.||.|:..|:...:.:
 Worm   289 IPQLPAALDL-----ASTIQSASMSLPLQTTIPQPMSAPQHALWQHGMCAWPSCDQPCDSVMALI 348

Human   325 KHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLHVK----------------- 372
            .||..||...|:|..:.|.|::.|:.:|.:|:.::.|||.||.||.:|                 
 Worm   349 THLQHEHPPSDKSNEEMRNQIEKVESIEHKLSVERSRLQGMMQHLRMKPSPDTTTPNLVKMEAQS 413

Human   373 ------------------------STEPKAAPQP------LNLVSSVTLSKSASEASP------- 400
                                    :::|:.:|..      |::.::|..|.:|:..||       
 Worm   414 PLRSPKIEGAAFSIQPAQQFQQQTTSQPQVSPTSEAASSLLSIAATVAASTAAAVTSPINQISTV 478

Human   401 ---QSLP-------HTPTTPTAPLTPVTQGP-------SVITTTSMH----TVGPIRRRYSDKYN 444
               .|:|       .|.:.|::.....:.||       |..|.||.:    :..|.|.|.|||..
 Worm   479 PSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVPRRSRISDKTV 543

Human   445 VPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATW 509
            .||:: |||:|::||:..:||||:||||||||||:||.:.||||||||.|||..|||||||||||
 Worm   544 QPIAT-DIAKNRDFYRTNDVRPPYTYASLIRQAIMESSDCQLTLNEIYTWFTETFAYFRRNAATW 607

Human   510 KGAIRTNLSLHKCFIRVEDEF-GSFWTVDDEEFKRGR----HIQRGRPRKYCPDE---------- 559
            |.|:|.||||||||.|||... |:.|||||.||.|.|    ...|.:|:...||:          
 Worm   608 KNAVRHNLSLHKCFQRVEQNVKGAVWTVDDSEFYRRRPNRASATRSQPQTPLPDDISQQKLFDTS 672

Human   560 ---NFDELVAHNPSLIKNMQSSHAYCTPLNAALQASMAENSIPLYTTASMGNP-TLGNLASAIRE 620
               :|.|:...:|:.:...|..      ||..|     ::.:.|...|.:.|| .:.:.|:|...
 Worm   673 ALSSFLEMQNFDPASLTGDQFQ------LNGNL-----DSVLSLLANADVNNPLQMLSAAAAAGN 726

Human   621 ELNGAMEHTNSNESDSSPGRSPMQAVHPVHVKEEPLDPEEAEGPLSLVTTANH 673
            ...|.:|....|                 :||||.:|..|.... .|:..|.|
 Worm   727 HSGGILEGQLLN-----------------NVKEEMMDVSEPHNG-HLLRVARH 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FOXP1NP_001231739.1 FOXP-CC 302..369 CDD:465036 24/66 (36%)
FH_FOX 464..545 CDD:469596 61/81 (75%)
fkh-7NP_001023147.1 FOXP-CC 326..393 CDD:465036 24/66 (36%)
FH_FOXP2 562..644 CDD:410839 61/81 (75%)

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