Sequence 1: | NP_055211.2 | Gene: | VPS41 / 27072 | HGNCID: | 12713 | Length: | 854 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036415.2 | Gene: | lt / 3355130 | FlyBaseID: | FBgn0002566 | Length: | 841 | Species: | Drosophila melanogaster |
Alignment Length: | 848 | Identity: | 321/848 - (37%) |
---|---|---|---|
Similarity: | 492/848 - (58%) | Gaps: | 42/848 - (4%) |
- Green bases have known domain annotations that are detailed below.
Human 11 SLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGN 75
Human 76 -ITQKFDVS-----PVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHE-TFDCPIKIIAVH 133
Human 134 PHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDII 198
Human 199 SKQRIT------NVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHASEMR--DLP 255
Human 256 SRYVEIVSQFETEFYISGLAPL-CDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSETCEEISS 319
Human 320 DALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEI 384
Human 385 SQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYL 449
Human 450 PRGDPV-LKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT 513
Human 514 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKI 578
Human 579 SIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKA 643
Human 644 LEICQQRNFVEETVYLLSRMG--NSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDK 706
Human 707 PPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSL 771
Human 772 LKKMHRTQMKGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCN 836
Human 837 ICS 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VPS41 | NP_055211.2 | Interaction with ARL8B. /evidence=ECO:0000269|PubMed:25908847 | 1..540 | 211/545 (39%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..33 | 8/21 (38%) | |||
WD40 repeat | 138..169 | CDD:293791 | 11/30 (37%) | ||
WD40 repeat | 174..205 | CDD:293791 | 11/36 (31%) | ||
CHCR | 568..712 | 60/145 (41%) | |||
CLH | 571..708 | CDD:128594 | 59/138 (43%) | ||
RING-H2_Vps41 | 787..841 | CDD:319604 | 13/53 (25%) | ||
lt | NP_001036415.2 | WD40 repeat | 33..81 | CDD:293791 | 17/47 (36%) |
WD40 | <42..204 | CDD:295369 | 60/164 (37%) | ||
WD40 repeat | 90..123 | CDD:293791 | 14/32 (44%) | ||
WD40 repeat | 130..168 | CDD:293791 | 13/38 (34%) | ||
CLH | 570..707 | CDD:128594 | 59/139 (42%) | ||
Clathrin | 580..708 | CDD:279031 | 55/129 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165159882 | |
Domainoid | 1 | 1.000 | 387 | 1.000 | Domainoid score | I799 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2066 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H69165 | |
Inparanoid | 1 | 1.050 | 550 | 1.000 | Inparanoid score | I1144 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54432 | |
OrthoDB | 1 | 1.010 | - | - | D103854at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004492 | |
OrthoInspector | 1 | 1.000 | - | - | oto89443 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103391 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12616 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1654 |
SonicParanoid | 1 | 1.000 | - | - | X3779 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |