DRSC/TRiP Functional Genomics Resources

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Protein Alignment GJB3 and gjb3

DIOPT Version :10

Sequence 1:NP_076872.1 Gene:GJB3 / 2707 HGNCID:4285 Length:270 Species:Homo sapiens
Sequence 2:NP_001017685.1 Gene:gjb3 / 550380 ZFINID:ZDB-GENE-050417-174 Length:304 Species:Danio rerio


Alignment Length:301 Identity:181/301 - (60%)
Similarity:210/301 - (69%) Gaps:41/301 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCY 65
            |||||.|||||||||||||||||||||||||||:||||||||||||||||||||||||||.||||
Zfish     1 MDWKTFQALLSGVNKYSTAFGRIWLSVVFVFRVMVYVVAAERVWGDEQKDFDCNTKQPGCANVCY 65

Human    66 DNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNAGKKHGGLWWT 130
            |.|||||:|||||||||.||||||:|::||.|||||||:.:       ||||||.||||||||||
Zfish    66 DFYFPISHIRLWALQLILVTCPSLMVVMHVKYREERERKAK-------AKLYDNTGKKHGGLWWT 123

Human   131 YLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGAS 195
            ||.||..|..||..|||:||.::..|.:||||:| :|.||||:|||||.|||||::|||||||||
Zfish   124 YLISLFAKTGIEITFLYILHHIYDSFYLPRLVKC-DVQPCPNVVDCYIGRPTEKRVFTYFMVGAS 187

Human   196 AVCIVLTICELCYLICHRVLRGLHKDKPRGGCS-PSSSASRASTCRCH---HKLVEAGEVDPD-- 254
            |:||||::||:.|||..|:.|..:|.|.....| |.:...|.....|.   |:|....|..|:  
Zfish   188 ALCIVLSVCEIIYLIAKRISRCANKYKRHDKRSTPINQRYRDEDSNCTIPLHELESKPEYKPETK 252

Human   255 --------PG-------------------NNKLQASAPNLT 268
                    ||                   :..::||||||:
Zfish   253 EDFRSEYKPGPKPQFKSEVKPTFKPAYRLSVDMRASAPNLS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GJB3NP_076872.1 Connexin 2..211 CDD:459638 159/208 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..270 10/48 (21%)
gjb3NP_001017685.1 Connexin 2..202 CDD:459638 158/207 (76%)

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