DRSC/TRiP Functional Genomics Resources

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Protein Alignment GJB3 and Gjb3

DIOPT Version :10

Sequence 1:NP_076872.1 Gene:GJB3 / 2707 HGNCID:4285 Length:270 Species:Homo sapiens
Sequence 2:NP_062113.1 Gene:Gjb3 / 29585 RGDID:2695 Length:270 Species:Rattus norvegicus


Alignment Length:270 Identity:224/270 - (82%)
Similarity:248/270 - (91%) Gaps:0/270 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCY 65
            ||||.||.||||||:||||||||||||||||||||||||||||||||||||||||:|||||||||
  Rat     1 MDWKKLQDLLSGVNQYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTRQPGCTNVCY 65

Human    66 DNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNAGKKHGGLWWT 130
            ||:||||||||||||||||||||:||||||||||||||:||||||:.|||||.:.||||||||||
  Rat    66 DNFFPISNIRLWALQLIFVTCPSMLVILHVAYREERERKHRQKHGEHCAKLYSHPGKKHGGLWWT 130

Human   131 YLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGAS 195
            ||||||||||||.:|||:||||||||.||||||||:|.||||.||||||||||||:|||||||||
  Rat   131 YLFSLIFKLIIELVFLYVLHTLWHGFTMPRLVQCASVVPCPNTVDCYIARPTEKKVFTYFMVGAS 195

Human   196 AVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCRCHHKLVEAGEVDPDPGNNKL 260
            ||||:|||||:||||.||::|||.|||.....|...|:||||||||||||:|:|:::..|.::||
  Rat   196 AVCIILTICEICYLIFHRIMRGLSKDKSTKSISSPKSSSRASTCRCHHKLLESGDLEAVPADDKL 260

Human   261 QASAPNLTPI 270
            |||||:||||
  Rat   261 QASAPSLTPI 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GJB3NP_076872.1 Connexin 2..211 CDD:459638 186/208 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..270 10/19 (53%)
Gjb3NP_062113.1 Connexin 2..211 CDD:459638 186/208 (89%)

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