DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP2C1 and SERCA

DIOPT Version :9

Sequence 1:NP_001365440.1 Gene:ATP2C1 / 27032 HGNCID:13211 Length:983 Species:Homo sapiens
Sequence 2:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster


Alignment Length:1003 Identity:342/1003 - (34%)
Similarity:517/1003 - (51%) Gaps:155/1003 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    65 VSEVASILQADLQNGLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISV 129
            |.:..:....|.:.||...::...:..:|.||....|.:.:|:..:.||.:.|:.:||.:|:||.
  Fly     9 VEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDLLVKILLLAAIISF 73

Human   130 LMHQFDD-------AVSITVAILIVVTVAFV---QEYRSEKSLEELSKLVPPECHCVREGK--LE 182
            ::..|::       .|...|.:||::..|.|   ||..:|.::|.|.:..|.....||:.|  ::
  Fly    74 VLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVVRQDKSGIQ 138

Human   183 HTLARDLVPGDTVCLSVGDRVPADLRL--FEAVDLSIDESSLTGETTPCSKVT--APQPAATNGD 243
            ...|:::||||.|.:||||::|||:|:  ..:..|.||:|.||||:....|.|  .|.|.|.|.|
  Fly   139 KVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQD 203

Human   244 LASRSNIAFMGTLVRCGKAKGVVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSF 308
               :.||.|.||.|..|||:|||||||.::..|::...|...|..|||||:.:|..|:|||    
  Fly   204 ---KKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLS---- 261

Human   309 GIIGIIMLVGWLLG--------------KDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRM 359
            .:|.:|.:..|.:.              |..:..|.|:|:|||||||||||.|:|..||||..||
  Fly   262 KVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 326

Human   360 VKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDG--------LHAEVTGVGYNQ 416
            .||.|||:.||.||||||.:|||||||||||.|:|:|:.:|..|.        |..|:||..|..
  Fly   327 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEP 391

Human   417 FGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTL------MGKPTEGALIALAMKM---- 471
            .|||.::|..:.......:..:.....:|||:.|..|..      :|:.||.|||.||.|:    
  Fly   392 IGEVFLNGQRIKAADYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFS 456

Human   472 ----GLD----------GLQQDYIRKAEYPFSSEQKWMAVKCVHRTQQDR----PEICFMKGAYE 518
                |||          .::..:.::....||.::|.|:..|. ..:..|    |:: |:|||.|
  Fly   457 VNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCT-PLKASRLGTGPKL-FVKGAPE 519

Human   519 QVIKYCT-----------TYQSKGQTLTLTQQQ---RDVYQQEKARMGSAGLRVLAL--ASGP-- 565
            .|::.||           |...|.:.|.||.|.   ||.            ||.|||  |..|  
  Fly   520 GVLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDT------------LRCLALAVADSPMK 572

Human   566 ----ELG----------QLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAIAS 616
                :||          .|||:|:||::||||..|.:::....|:|:.:.:||||::.||.||..
  Fly   573 PDEMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICR 637

Human   617 RLGLYSK----TSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTG 677
            |:|::::    |.:|.||.|.|.:...:....|.:..:|.|..|:||.||::.||....:.||||
  Fly   638 RIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTG 702

Human   678 DGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLS 742
            ||||||.|||.|:||:||| :||.|.|.||:|:|.||:|.:|:||:|||:.||||:|.|:|:.:|
  Fly   703 DGVNDAPALKKAEIGIAMG-SGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLIS 766

Human   743 TSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTK 807
            ::|..:..|.|...:..|..|..:|:||:|::.||.||.:||..|.|.|::.||||...:.:::.
  Fly   767 SNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKADEGLISG 831

Human   808 NLILKILVSSIIIVCGTL------FVF---------WR------------ELR--DNVI--TPRD 841
            .|..:.:.....:...|:      |||         |:            |.:  |..|  .|..
  Fly   832 WLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDEFKGVDCKIFSDPHA 896

Human   842 TTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVFQTES 906
            .||..:..|..:|.||::|.|:.:|:..:....|.....::..|.....:::|...|..|||...
  Fly   897 MTMALSVLVTIEMLNAMNSLSENQSLITMPPWCNLWLIGSMALSFTLHFVILYVDVLSTVFQVTP 961

Human   907 LSILDLLFLLGLTSSVCIVAEIIKKVER 934
            ||..:.:.::..:..|.::.|.:|.|.|
  Fly   962 LSAEEWITVMKFSIPVVLLDETLKFVAR 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP2C1NP_001365440.1 ATPase-IIA2_Ca 57..937 CDD:130585 342/1003 (34%)
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 341/1001 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0202
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D100699at2759
OrthoFinder 1 1.000 - - FOG0000231
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100158
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.730

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