| Sequence 1: | NP_002559.2 | Gene: | PABPC1 / 26986 | HGNCID: | 8554 | Length: | 636 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
| Alignment Length: | 201 | Identity: | 61/201 - (30%) |
|---|---|---|---|
| Similarity: | 104/201 - (51%) | Gaps: | 26/201 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Human 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Human 255 ELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGT 319
Human 320 ITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--ATKPLYVALAQRKEERQAHLTN 380
Human 381 QYMQRM 386 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PABPC1 | NP_002559.2 | PABP-1234 | 11..615 | CDD:130689 | 61/201 (30%) |
| CSDE1-binding | 166..289 | 30/98 (31%) | |||
| (Microbial infection) Binding to HRSV M2-1 protein. /evidence=ECO:0000269|PubMed:31649314 | 541..636 | ||||
| ssx | NP_569908.1 | sex-lethal | <76..272 | CDD:273740 | 61/199 (31%) |
| Blue background indicates that the domain is not in the aligned region. | |||||