DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMHR2 and tgfbr2l

DIOPT Version :9

Sequence 1:XP_011536475.1 Gene:AMHR2 / 269 HGNCID:465 Length:593 Species:Homo sapiens
Sequence 2:XP_688938.2 Gene:tgfbr2l / 560446 ZFINID:ZDB-GENE-081105-143 Length:590 Species:Danio rerio


Alignment Length:592 Identity:167/592 - (28%)
Similarity:251/592 - (42%) Gaps:133/592 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    56 LYSRCCFGIWNLTQDRAQVEMQG-CRDSDE-------PGCESLHCDPSPRAHPSPGSTLFTCSC- 111
            |....|..||.  :|...|.::. |.|...       ....|..|..||  |||....||.||| 
Zfish    57 LAEEVCVAIWK--KDNVSVSVRTLCYDPQHMLENIMLANYSSKECLMSP--HPSEDGLLFICSCV 117

Human   112 GTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYR 176
            |...||...  :...|..|....:.....|       :|::.|...||:    .::|.:....||
Zfish   118 GDQECNDRL--IFDKGPNGFSKLKSKDVIP-------VVVISLVPPLLV----AVIATMAFYLYR 169

Human   177 VRGEPVPEPR-------------PDSGR----DWSVEL--------QELPELCFS---------- 206
            .| :|..:|:             |..|:    |:|.:.        .|:...|.:          
Zfish   170 TR-QPGKKPKEWGPRRTHYQSLDPAEGQANGIDFSAKRPSLSDDINSEMSSTCANNLNHNTEQLP 233

Human   207 ---QQVIREGGHAVVWAGQL------QGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFI 262
               :.::.:|..|.||..:|      |.:.||:|.||....:.:..|||::....|:|:::|:|:
Zfish   234 IQLEALVGKGRFAEVWRARLSHNESGQYETVAVKIFPAVEYSSWCNERAIFSDANLKHENVVQFL 298

Human   263 TA-SRGGPGRLLSGPLLVLELHPKDCVCLCPRGRAPHNSLCPIGSLCHYLTQYTSDWGSSLRMAL 326
            || .|||..........::              .|.:|    :|:|..:|......|.....:|.
Zfish   299 TAEERGGTSATSQRQYWLI--------------MAYYN----MGNLQDFLVGNILTWAELCSLAG 345

Human   327 SLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLP-GLTQPPAWTPT 390
            |:|:|||.||.:....|..|..||||||.|.|::::....|.:.|.||||.|. .||....    
Zfish   346 SVARGLAHLHSDTTPCGIQKVPIAHRDLKSSNIVLKNQSECVLCDFGLALRLDLSLTVDDF---- 406

Human   391 QPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDL-RPDSSPP 454
                 |...:.||.||||||:|:..::|:|. .:.::.||||:||::||::|||..: ...|..|
Zfish   407 -----ANSGQVGTARYMAPEVLESRVNLEDL-ESFKQIDIYSMALVMWEMVSRCDVIGEVKSYEP 465

Human   455 PFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLREL---LEDCWDADPEARL 516
            ||    .:::...|..|.:..|.:::|.||.||.:|    |...|::.|   :.:|||.||||||
Zfish   466 PF----GSKVCEQPCVDSMRDLVLRDRGRPDIPDSW----TTHSGMQLLCATITECWDHDPEARL 522

Human   517 TAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCS 581
            ||.||.:|...||..:..:......| ..||  .||.|    || ||..|            ||:
Zfish   523 TAHCVVERFNTLAQEELENSICTHTP-STPP--TEDQT----PT-LPSHP------------PCT 567

Human   582 RNPQPAC 588
            .:....|
Zfish   568 DHSADIC 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMHR2XP_011536475.1 Pkinase 208..531 CDD:278497 111/334 (33%)
PKc_like 208..528 CDD:304357 109/331 (33%)
tgfbr2lXP_688938.2 ecTbetaR2 28..131 CDD:286061 23/79 (29%)
S_TKc 235..525 CDD:214567 105/325 (32%)
STKc_TGFbR2_like 238..535 CDD:270957 109/332 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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