DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMHR2 and daf-4

DIOPT Version :9

Sequence 1:XP_011536475.1 Gene:AMHR2 / 269 HGNCID:465 Length:593 Species:Homo sapiens
Sequence 2:NP_498211.1 Gene:daf-4 / 175781 WormBaseID:WBGene00000900 Length:744 Species:Caenorhabditis elegans


Alignment Length:640 Identity:150/640 - (23%)
Similarity:243/640 - (37%) Gaps:189/640 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    51 RAIRCLYSRCCFGI----WNLTQ-----DRAQVEMQGC---RDSDEPGCESLHCDPSPRAHPSPG 103
            :|:.||   ..||:    .|.|:     |:.|.:..||   :.:|...||:   :.|.|...|..
 Worm   118 KAVGCL---AVFGLPTQEINSTEPYLKVDKPQYKSLGCMPYQHADSMNCEN---ESSCRQGRSFR 176

Human   104 STLFTCSCGTDFCN-------ANYSHLPPPGSPGTPGSQGPQAAPGESI------WMALVLLGLF 155
            ..:..|.|.|:.||       .|.|......:.....:..|.....||:      |:.::.|.:.
 Worm   177 GGIGMCCCSTNNCNMPDLIEMVNPSLKKDSDNSALLWASTPSNMDLESLDKFPFYWIIIIALSVI 241

Human   156 L-LLLLLLGSIILALLQRKNYRVRGE------------------PVPEPRPDSGRDWSVELQELP 201
            | :.||:|..:.....|.|...::.:                  |:.||..:     .:|:.|.|
 Worm   242 LCIALLILAYVGWKFQQNKKEEIKKQQKIKFDMEKTDALEAGNVPLVEPEEE-----MIEMVETP 301

Human   202 -ELCFSQ-QVIREGGHAVVWAGQL-----QGKLVAIKAFPPRSVAQFQAERALY----ELPGLQH 255
             ||..:. |:|.:|....|:..|.     :.:|||:|.......|.|.||:.::    |.| ..:
 Worm   302 KELPITDFQLISKGRFGKVFKAQYTPDSGEKRLVAVKKLNEFQKASFLAEKRIFDELNEYP-KWY 365

Human   256 DHIVRFITASRGGPGRLLSGPLLVLELHPKDCVCLCPRGRAPHNSLCPIGSLCHYLTQYTSDWGS 320
            ..||.|:.|.:.|     ....:|.|.|.:                   .||...|........|
 Worm   366 KSIVEFVCAEKIG-----DEYWIVTEFHER-------------------LSLYELLKNNVISITS 406

Human   321 SLRMALSLAQGLAFLHEER-WQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQP 384
            :.|:.:|:..||.|||::| :..|..|..|.|||:.|:|:|::.|.:..|.|.|||.:.      
 Worm   407 ANRIIMSMIDGLQFLHDDRPYFFGHPKKPIIHRDIKSKNILVKSDMTTCIADFGLARIY------ 465

Human   385 PAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRP 449
             ::...|..   .:.:.||:|||:||:|:...:...  .|.:..|:||:.|::||::|| ..|..
 Worm   466 -SYDIEQSD---LLGQVGTKRYMSPEMLEGATEFTP--TAFKAMDVYSMGLVMWEVISR-TKLHQ 523

Human   450 DSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDG---------LRELLE 505
            ...||.:|:.::. :|..||...:....|.::.||    .||      |.         |:::.|
 Worm   524 TDEPPNYQMPFQV-IGFDPTIGLMRNYVVSKKERP----QWR------DEIIKHEYMSLLKKVTE 577

Human   506 DCWDADPEARLTAECV-------------------------------------------QQRLAA 527
            :.||.:..||:||.|.                                           .|...|
 Worm   578 EMWDPEACARITAGCAFARVWNHIMSSPDSSEGYHSGSSMKNRGVDDVEQSEKPEGIEEMQHYHA 642

Human   528 LAHPQESHPFP----ESCPRGCPP------------LCPEDCTSIPAPTILPCRP 566
            .:..:..||.|    :|||   ||            |.|::..  |.|..||..|
 Worm   643 SSPSKRQHPSPNPFFDSCP---PPPPIPVILENGGILQPDNAE--PEPEELPDLP 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMHR2XP_011536475.1 Pkinase 208..531 CDD:278497 92/384 (24%)
PKc_like 208..528 CDD:304357 91/381 (24%)
daf-4NP_498211.1 ET <146..192 CDD:279950 14/48 (29%)
PKc_like 310..603 CDD:304357 90/341 (26%)
S_TKc 310..590 CDD:214567 87/328 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D191771at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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