DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cops6 and CSN6

DIOPT Version :9

Sequence 1:NP_036132.1 Gene:Cops6 / 26893 MGIID:1349439 Length:324 Species:Mus musculus
Sequence 2:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster


Alignment Length:333 Identity:192/333 - (57%)
Similarity:256/333 - (76%) Gaps:10/333 - (3%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAAAAAAGANGSGGSSGMEVDAAVPS--------VMASGVTGSVSVALHPLVILNISDHWIRMRS 57
            |:|..:..::.:.||| |.||.....        :.|:|.:|||:::||||||:|||:||.|.|:
  Fly    10 MSAKPSTSSSAAAGSS-MAVDKTADQNPQPQGNIMAAAGTSGSVTISLHPLVIMNISEHWTRFRA 73

Mouse    58 QEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWY 122
            |.|.|.||.|||||||:|||||:||||||.:..:.::.:|:|:||..||:|:||||.:|:|:|||
  Fly    74 QHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWY 138

Mouse   123 TTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD-LPVSVFESVIDIINGEATMLFAELTYT 186
            |||..|...||.:.:|:..|.|.|:.|:|||:::..| ||:.:|||:||:::|||||||..||||
  Fly   139 TTGDNPTADDIKIQRQIAAINECPIMLQLNPLSRSVDHLPLKLFESLIDLVDGEATMLFVPLTYT 203

Mouse   187 LATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNH 251
            ||||||||||||||||||:..|||.|.|||||:||.||||||::|:|::|:|::..|||::..|.
  Fly   204 LATEEAERIGVDHVARMTSNESGEKSVVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQ 268

Mouse   252 EILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIG 316
            |||||||||||.|||:....|:.:||.|||||||::||||:||.||.|:.||||||:||||||..
  Fly   269 EILREAYALCHRLPVMQVPAFQEEFYTQCNDVGLISYLGTLTKGCNDMHHFVNKFNMLYDRQGSA 333

Mouse   317 RRMRGLFF 324
            ||||||::
  Fly   334 RRMRGLYY 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cops6NP_036132.1 MPN_CSN6 36..318 CDD:163694 174/282 (62%)
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 174/282 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837266
Domainoid 1 1.000 158 1.000 Domainoid score I4142
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4977
Inparanoid 1 1.050 398 1.000 Inparanoid score I1938
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55514
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005913
OrthoInspector 1 1.000 - - oto94427
orthoMCL 1 0.900 - - OOG6_103125
Panther 1 1.100 - - LDO PTHR10540
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4523
SonicParanoid 1 1.000 - - X4896
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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