Sequence 1: | NP_001276425.1 | Gene: | Egflam / 268780 | MGIID: | 2146149 | Length: | 1017 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
Alignment Length: | 1175 | Identity: | 280/1175 - (23%) |
---|---|---|---|
Similarity: | 437/1175 - (37%) | Gaps: | 275/1175 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 34 KVGPPLDIKLGALNCTAFSIQWKT----PKRSGSSIIGYTV-FYSEVGSDKSLRERSHNVPVGQD 93
Mouse 94 TLITEEVIGDLKPGTEYQVSVAAYSQTGKGRLSFPRHVTTLSQDSCLPPAAPQQPH--------V 150
Mouse 151 LVVSD-------SEVALSW-----RPGENEGSAPIQSYSVEFIRP-----------DFDKSWTII 192
Mouse 193 QERLQMDSMVIKGLD-PDTNYQFAVK-----AMNAHGFSPRSWPSNTVRTLGPG-EAGSGHYG-- 248
Mouse 249 -PGYITNPGVSEDDD---GSEDELDLDVSFEEVKPLPAT----KVGNKKFSVESKKTSVSNSVMG 305
Mouse 306 SRL--AQPTSASLHETT--VAIPPTPAQRKGKNSV-AMMSRLFDMSC--DET------------- 350
Mouse 351 ----------LCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFI---QYPQF--FGHSYVTFE 400
Mouse 401 PLKNSYQAFQVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGIAIIISETK 465
Mouse 466 IKLGAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYW-LVRATGTNR 529
Mouse 530 --GFQGCVQSLSVNGKKI-------------DMRPWPLGKALN---------------------- 557
Mouse 558 GADVG----ECSSGICDEASCIHGGTCAAIKADSYICLCPLGFRGRHCEDAFALTIPQFRESL-- 616
Mouse 617 -------RSYAATPWPLEPQHYLSFTEFEITF--RPDS-GDGVLLYSYDT--GSKDFLSINMAAG 669
Mouse 670 HVEFRFDCGSGTG--VLRSEAPLTLGQWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNT 732
Mouse 733 DIFIGGVPNYD----DVKKNSGILHPFSGSIQKIILNDRTIHVKHDFTSGVNVEN---------- 783
Mouse 784 ------------------------AAHPCVGAPCAHGGSCRPRKEGYECDCPLGFEGLNCQKECG 824
Mouse 825 NHCLNTIIEAIEI---PQFIGRSYLTYDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMR 886
Mouse 887 --PNSDFISLGLRDGALIFSYNLGSGVASIMVNGSF--SDGRWHRVKAVRDGQSGKITVDDYGAR 947
Mouse 948 TGKS-PGLMRQLNINGALYVGGMKEIALHTNRQYLRGLVGCISHFTLSTDYHISLVEDAVDGKNI 1011
Mouse 1012 NTCGA 1016 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Egflam | NP_001276425.1 | FN3 | 36..133 | CDD:238020 | 23/101 (23%) |
FN3 | 142..236 | CDD:238020 | 22/130 (17%) | ||
LamG | 391..541 | CDD:238058 | 53/154 (34%) | ||
EGF_CA | 560..602 | CDD:238011 | 13/45 (29%) | ||
LamG | 618..765 | CDD:238058 | 44/157 (28%) | ||
EGF_CA | 790..820 | CDD:238011 | 12/29 (41%) | ||
Laminin_G_2 | 868..993 | CDD:280389 | 36/129 (28%) | ||
trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
LDLa | 532..564 | CDD:238060 | |||
LDLa | 571..606 | CDD:238060 | |||
LDLa | 616..650 | CDD:238060 | |||
LDLa | 704..739 | CDD:238060 | |||
LDLa | 813..847 | CDD:238060 | |||
LDLa | 852..887 | CDD:238060 | |||
LDLa | 902..936 | CDD:238060 | |||
LDLa | 956..990 | CDD:238060 | |||
LDLa | 997..1030 | CDD:238060 | |||
LDLa | 1033..1067 | CDD:238060 | |||
LDLa | 1072..1105 | CDD:238060 | |||
LDLa | 1133..1165 | CDD:238060 | |||
LDLa | 1182..1215 | CDD:238060 | |||
LDLa | 1221..1251 | CDD:238060 | |||
LDLa | 1252..1286 | CDD:238060 | |||
LDLa | 1292..1326 | CDD:238060 | |||
IG | 1344..1421 | CDD:214652 | |||
Ig | 1344..1405 | CDD:299845 | |||
LDLa | 1439..1473 | CDD:238060 | |||
LDLa | 1479..1513 | CDD:238060 | |||
LDLa | 1522..1556 | CDD:238060 | |||
IG_like | 1566..1649 | CDD:214653 | |||
Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | |||
Laminin_B | 1748..1864 | CDD:278481 | |||
EGF_Lam | 1935..1989 | CDD:238012 | |||
Laminin_B | 2113..2238 | CDD:278481 | |||
EGF_Lam | <2250..2276 | CDD:238012 | |||
EGF_Lam | 2284..2333 | CDD:238012 | |||
Laminin_EGF | <2369..2399 | CDD:278482 | |||
Laminin_B | 2465..2587 | CDD:278481 | |||
I-set | 2686..2772 | CDD:254352 | |||
Ig_2 | 2689..2771 | CDD:290606 | |||
Ig | 2779..2865 | CDD:299845 | |||
IG_like | 2798..2864 | CDD:214653 | |||
Ig | 2882..2965 | CDD:299845 | |||
IG_like | 2882..2950 | CDD:214653 | |||
Ig | 2977..3061 | CDD:299845 | |||
IG_like | 2984..3058 | CDD:214653 | |||
IG_like | 3074..3152 | CDD:214653 | |||
Ig | 3086..3153 | CDD:299845 | |||
I-set | 3155..3243 | CDD:254352 | |||
IGc2 | 3171..3233 | CDD:197706 | |||
IG | 3371..3447 | CDD:214652 | 23/102 (23%) | ||
IGc2 | 3377..3437 | CDD:197706 | 20/89 (22%) | ||
Ig | 3456..3534 | CDD:299845 | 15/77 (19%) | ||
IG | 3465..>3526 | CDD:214652 | 10/60 (17%) | ||
Ig | 3603..3665 | CDD:299845 | 16/66 (24%) | ||
IG | 3610..3683 | CDD:214652 | 17/77 (22%) | ||
IG | 3696..3762 | CDD:214652 | 14/67 (21%) | ||
Ig | 3704..3771 | CDD:299845 | 14/68 (21%) | ||
LamG | 3784..3929 | CDD:238058 | 52/147 (35%) | ||
EGF | 3952..3984 | CDD:278437 | 3/31 (10%) | ||
LamG | 4032..4185 | CDD:238058 | 44/162 (27%) | ||
Laminin_G_2 | 4315..4444 | CDD:280389 | 36/130 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |