DRSC/TRiP Functional Genomics Resources

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Protein Alignment B3galt2 and brn

DIOPT Version :9

Sequence 1:NP_064409.3 Gene:B3galt2 / 26878 MGIID:1349461 Length:422 Species:Mus musculus
Sequence 2:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster


Alignment Length:293 Identity:82/293 - (27%)
Similarity:148/293 - (50%) Gaps:42/293 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse   124 NEKGTGHPNS--YHFKYI----------INEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGN 176
            ::.|:|..:|  ..|.|:          :::|.:       |.:||.:..|....|.|||:|||.
  Fly    46 DDTGSGSASSGLDKFAYLRVPSFTAEVPVDQPAR-------LTMLIKSAVGNSRRREAIRRTWGY 103

Mouse   177 ETLAPGIQIIRVFLLGISIKLNGYLQHAIQEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATY 241
            |.....:.:.||||||.:..    .:..:..|||::.||:|.|:.|.|:|.|:||::||.|.:..
  Fly   104 EGRFSDVHLRRVFLLGTAED----SEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQ 164

Mouse   242 CPHTPYVMKTDSDMFVNTEYLIHKLL-------KPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMP 299
            ...:.:.:..|.|.:|:.:.:: |.|       :|:|     .|.|::.: .:|.|:|.||||:.
  Fly   165 FNRSEFYLFVDDDYYVSAKNVL-KFLGRGRQSHQPEL-----LFAGHVFQ-TSPLRHKFSKWYVS 222

Mouse   300 PDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRVDPVPPPNEFVF 364
            .:.||.:|:|.:.:...::.|.....:::..|:.:.....:|||:||...|..:. :...::|.|
  Fly   223 LEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIVALKAGIS-LQHCDDFRF 286

Mouse   365 NHWRVSYSS-CKYSHLITSHQF-QPSELIKYWN 395
            :  |.:|.. ..||.:|.||:| .|.|:.:.||
  Fly   287 H--RPAYKGPDSYSSVIASHEFGDPEEMTRVWN 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B3galt2NP_064409.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..110
Galactosyl_T 165..359 CDD:250845 58/200 (29%)
brnNP_476901.1 Galactosyl_T 92..282 CDD:250845 58/201 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847378
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000088
OrthoInspector 1 1.000 - - otm42774
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X41
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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