DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFI1 and sens

DIOPT Version :10

Sequence 1:NP_005254.2 Gene:GFI1 / 2672 HGNCID:4237 Length:422 Species:Homo sapiens
Sequence 2:NP_524818.1 Gene:sens / 45328 FlyBaseID:FBgn0002573 Length:541 Species:Drosophila melanogaster


Alignment Length:110 Identity:96/110 - (87%)
Similarity:102/110 - (92%) Gaps:0/110 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   310 RSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCG 374
            |:|.||.|||||||||||||||||||||||||||||||||||||||||||:||||||||||.||.
  Fly   411 RNFQCKQCGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCL 475

Human   375 KAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQH 419
            ||||||||||||.|||||:|||||.||.:.||||||||||||::|
  Fly   476 KAFSQSSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRH 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFI1NP_005254.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109
SNAG domain. /evidence=ECO:0000250 1..20
Required for interaction with RELA. /evidence=ECO:0000269|PubMed:20547752 140..257
COG5048 <254..416 CDD:227381 93/105 (89%)
C2H2 Zn finger 257..278 CDD:275368
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368 18/19 (95%)
C2H2 Zn finger 342..362 CDD:275368 18/19 (95%)
C2H2 Zn finger 370..390 CDD:275368 16/19 (84%)
C2H2 Zn finger 398..417 CDD:275368 14/18 (78%)
sensNP_524818.1 zf-C2H2 413..435 CDD:395048 19/21 (90%)
C2H2 Zn finger 415..435 CDD:275368 18/19 (95%)
zf-C2H2 441..463 CDD:395048 20/21 (95%)
C2H2 Zn finger 443..463 CDD:275368 18/19 (95%)
zf-H2C2_2 455..480 CDD:463886 21/24 (88%)
C2H2 Zn finger 471..491 CDD:275368 16/19 (84%)
zf-H2C2_2 483..506 CDD:463886 17/22 (77%)
C2H2 Zn finger 499..516 CDD:275368 12/16 (75%)
Blue background indicates that the domain is not in the aligned region.

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