DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFI1 and CG7691

DIOPT Version :10

Sequence 1:NP_005254.2 Gene:GFI1 / 2672 HGNCID:4237 Length:422 Species:Homo sapiens
Sequence 2:NP_650728.1 Gene:CG7691 / 42228 FlyBaseID:FBgn0038626 Length:283 Species:Drosophila melanogaster


Alignment Length:106 Identity:37/106 - (34%)
Similarity:47/106 - (44%) Gaps:6/106 - (5%)


- Green bases have known domain annotations that are detailed below.


Human   247 RLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACE--MCGKTFGHAVSLEQH-KAVHSQ 308
            ||...||.::||.|.|.|.....|..|. |:|:|.:||.|.  .|.|.|....:|..| :.:...
  Fly   181 RLKRVGGQFECIDCDKKFDHSWMLTAHT-RTHTGEKPFVCPDGSCRKAFSDRSNLRSHQRTMGHH 244

Human   309 ERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF 349
            |....|..|||.|.:.|.|:.|.|  ...|.|......|||
  Fly   245 EWQHQCGQCGKYFSQFSYLNRHSL--DACRKYLLSVMHKRF 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFI1NP_005254.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109
SNAG domain. /evidence=ECO:0000250 1..20
Required for interaction with RELA. /evidence=ECO:0000269|PubMed:20547752 140..257 4/9 (44%)
COG5048 <254..416 CDD:227381 33/99 (33%)
C2H2 Zn finger 257..278 CDD:275368 8/20 (40%)
C2H2 Zn finger 286..306 CDD:275368 6/22 (27%)
C2H2 Zn finger 314..334 CDD:275368 9/19 (47%)
C2H2 Zn finger 342..362 CDD:275368 3/8 (38%)
C2H2 Zn finger 370..390 CDD:275368
C2H2 Zn finger 398..417 CDD:275368
CG7691NP_650728.1 COG5048 188..>271 CDD:227381 28/85 (33%)
C2H2 Zn finger 191..211 CDD:275368 8/20 (40%)
C2H2 Zn finger 219..244 CDD:275368 6/24 (25%)
C2H2 Zn finger 250..266 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.

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