DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFI1 and CG11247

DIOPT Version :10

Sequence 1:NP_005254.2 Gene:GFI1 / 2672 HGNCID:4237 Length:422 Species:Homo sapiens
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:57 Identity:16/57 - (28%)
Similarity:20/57 - (35%) Gaps:26/57 - (45%)


- Green bases have known domain annotations that are detailed below.


Human   159 LSTFFGTLHPGFYSSSREAFTYERRPQSQAYI----------PWDRGDF-----YYG 200
            :.||.|          |....|.|....|::|          ||| |:|     |||
  Fly   478 VKTFLG----------RPWKLYSRTVIMQSFIDNHIDPAGWFPWD-GEFALSTLYYG 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFI1NP_005254.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109
SNAG domain. /evidence=ECO:0000250 1..20
Required for interaction with RELA. /evidence=ECO:0000269|PubMed:20547752 140..257 16/57 (28%)
COG5048 <254..416 CDD:227381
C2H2 Zn finger 257..278 CDD:275368
C2H2 Zn finger 286..306 CDD:275368
C2H2 Zn finger 314..334 CDD:275368
C2H2 Zn finger 342..362 CDD:275368
C2H2 Zn finger 370..390 CDD:275368
C2H2 Zn finger 398..417 CDD:275368
CG11247NP_649351.2 COG5048 <88..247 CDD:227381
C2H2 Zn finger 95..115 CDD:275368
C2H2 Zn finger 123..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368
COG5048 <192..369 CDD:227381
C2H2 Zn finger 210..230 CDD:275370
C2H2 Zn finger 238..260 CDD:275371
C2H2 Zn finger 267..287 CDD:275368
C2H2 Zn finger 295..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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