Sequence 1: | NP_001310441.1 | Gene: | AMFR / 267 | HGNCID: | 463 | Length: | 675 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492602.2 | Gene: | hrdl-1 / 172833 | WormBaseID: | WBGene00009164 | Length: | 579 | Species: | Caenorhabditis elegans |
Alignment Length: | 673 | Identity: | 152/673 - (22%) |
---|---|---|---|
Similarity: | 271/673 - (40%) | Gaps: | 160/673 - (23%) |
- Green bases have known domain annotations that are detailed below.
Human 6 LERFPWPSLRTYTGLSGLALL---GTIISAYRALSQPEAGPGEPDQLTASLQPEPPAPARPSA-- 65
Human 66 -------GGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFW 123
Human 124 NFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFL-HLMVQLCKDRFEYLSFSPTTPMSSHGRVL 187
Human 188 SLLVAMLLSCCGLAAVCSITGYTHGM--HTLAFMAAESLLVTVRTAHVILRYV--IHLWDLN--- 245
Human 246 --HEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNI-----WLSMASLVIFMQLRYLFH 303
Human 304 EVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDD-CAICWDSMQAARKLPCGHLFHNSCLRS 367
Human 368 WLEQDTSCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLNQHNH-FFHFDGDDSSM 431
Human 432 RVTAPEDVPVGQEVEVVDSDTDAPDLWSRIASWLPSFSVEVMHTTN-ILG-ITQASNSQLNAMAH 494
Human 495 QIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRSDSIRPALNSPVERPSSDQEE 559
Human 560 GETSAQTERVPLDLSPRLEETLDFGEVEVEPSEVEDFEARGSR------FSKSADERQRMLVQRK 618
Human 619 DELLQQARKRFLNKSSEDDAASE 641 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
AMFR | NP_001310441.1 | None | |||
hrdl-1 | NP_492602.2 | HRD1 | <200..>407 | CDD:227568 | 54/237 (23%) |
zf-RING_2 | 348..388 | CDD:290367 | 21/39 (54%) | ||
CUE_AMFR | 449..489 | CDD:270604 | 16/39 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C161472038 | |
Domainoid | 1 | 1.000 | 63 | 1.000 | Domainoid score | I7431 |
eggNOG | 1 | 0.900 | - | - | E1_COG5243 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H888 | |
Inparanoid | 1 | 1.050 | 163 | 1.000 | Inparanoid score | I3239 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG55068 | |
OrthoDB | 1 | 1.010 | - | - | D271732at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006872 | |
OrthoInspector | 1 | 1.000 | - | - | oto22436 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105132 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15067 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3836 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |