DRSC/TRiP Functional Genomics Resources

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Protein Alignment neurod4 and CG33557

DIOPT Version :10

Sequence 1:NP_739568.2 Gene:neurod4 / 266958 ZFINID:ZDB-GENE-030730-1 Length:348 Species:Danio rerio
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:101 Identity:34/101 - (33%)
Similarity:51/101 - (50%) Gaps:16/101 - (15%)


- Green bases have known domain annotations that are detailed below.


Zfish    56 DMDEEEEEEEDEEMGLDGEKAPKRRGPKKKKMTKARQERFRARRIKANARERSRMHGLNDALDNL 120
            |.::.:..:|....|.:.:...:||.|::                |.|||||.|...:|.|.:.|
  Fly    36 DSEDSQIGQEANPGGQENQGNHRRRPPRQ----------------KINARERYRTFNVNSAYEAL 84

Zfish   121 RRVMPCYSKTQKLSKIETLRLARNYIWALSEVLESG 156
            |.::|.....:||||||.:|||.:||..||..||:|
  Fly    85 RNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLETG 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurod4NP_739568.2 bHLH_TS_NeuroD4_ATOH3 70..155 CDD:381564 30/84 (36%)
Neuro_bHLH 156..272 CDD:463621 1/1 (100%)
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 25/69 (36%)

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